DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Lupus Erythematosus, Systemic ×

Variants associated to the Gene: ITGAM ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs11860650	ITGAM	0.882	0.120	16	31315385	intron variant	C/T	snv		0.14	2
rs1143679	ITGAM	0.732	0.520	16	31265490	missense variant	G/A	snv	9.7E-02	0.11	1
rs12928725	ITGAM	1.000	0.080	16	31272675	intron variant	G/A;T	snv			1
rs34572943	ITGAM	1.000	0.080	16	31261032	intron variant	G/A	snv		0.11	1
rs35472514	ITGAM	1.000	0.080	16	31272002	intron variant	C/G;T	snv	0.12	0.12	1
rs9888739	ITGAM	0.882	0.120	16	31301932	intron variant	C/T	snv		0.26	1