DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Parkinson Disease ×

Variants associated to the Gene: LRRK2 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1491942	LRRK2	1.000	0.040	12	40227006	intron variant	C/G	snv		0.23	1
rs28903073	LRRK2	1.000	0.040	12	40259708	intron variant	G/A	snv		2.4E-03	1
rs34637584	LRRK2	0.583	0.480	12	40340400	missense variant	G/A	snv	5.3E-04	3.6E-04	1
rs34778348	LRRK2 ; LOC105369736	0.742	0.120	12	40363526	missense variant	G/A	snv	1.7E-03	5.8E-04	1
rs76904798	LRRK2 ; LRRK2-DT	0.925	0.080	12	40220632	intron variant	C/T	snv		0.13	1