Source: ALL

Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1452
Gene Symbol: CSNK1A1
CSNK1A1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE Rps14, Csnk1a1 and miRNA145/miRNA146a deficiency cooperate in the clinical phenotype and activation of the innate immune system in the 5q- syndrome. 30651631

2019

Entrez Id: 6279
Gene Symbol: S100A8
S100A8
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE The increased S100A8 expression in the mesenchymal niche was confirmed in 5q- syndrome patients. 30651631

2019

Entrez Id: 649159
Gene Symbol: LINC00273
LINC00273
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE These studies identify a 40S ribosome function independent of those in translation that, with LARP1, mediates the autogenous control of 5′TOP mRNA stability, whose disruption is implicated in the pathophysiology of 5q− syndrome. 28673543

2017

Entrez Id: 80036
Gene Symbol: TRPM3
TRPM3
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Cross-reactivity with TRPM3 in the RPE may account for other visual symptoms that are experienced by some MAR patients such as retinal and RPE detachments. 28549093

2017

Entrez Id: 7064
Gene Symbol: THOP1
THOP1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE These studies identify a 40S ribosome function independent of those in translation that, with LARP1, mediates the autogenous control of 5′TOP mRNA stability, whose disruption is implicated in the pathophysiology of 5q− syndrome. 28673543

2017

Entrez Id: 23367
Gene Symbol: LARP1
LARP1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE These studies identify a 40S ribosome function independent of those in translation that, with LARP1, mediates the autogenous control of 5′TOP mRNA stability, whose disruption is implicated in the pathophysiology of 5q− syndrome. 28673543

2017

Entrez Id: 3313
Gene Symbol: HSPA9
HSPA9
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE Here we demonstrate that mutations in HSPA9, a mitochondrial HSP70 homolog located in the chromosome 5q deletion syndrome 5q33 critical deletion interval and involved in mitochondrial Fe-S biogenesis, result in CSA inherited as an autosomal recessive trait. 26491070

2015

Entrez Id: 4615
Gene Symbol: MYD88
MYD88
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE We report a case of 5q-syndrome following a MGUS IgMk with mutation of MYD88 L256P. 25159121

2015

Entrez Id: 3308
Gene Symbol: HSPA4
HSPA4
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Here we demonstrate that mutations in HSPA9, a mitochondrial HSP70 homolog located in the chromosome 5q deletion syndrome 5q33 critical deletion interval and involved in mitochondrial Fe-S biogenesis, result in CSA inherited as an autosomal recessive trait. 26491070

2015

Entrez Id: 10661
Gene Symbol: KLF1
KLF1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE EKLF mRNA level was significantly decreased in the blood and bone marrow of 5q- syndrome and in all DBA patients. 22965552

2013

Entrez Id: 2313
Gene Symbol: FLI1
FLI1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE We propose that the elevated Fli1 in 5q- syndrome protects megakaryocytic cells from ribosomal stress contrary to erythroid cells and contributes to effective though dysplastic megakaryopoiesis. 22965552

2013

Entrez Id: 1236
Gene Symbol: CCR7
CCR7
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE We report a rare 5q- syndrome case which ultimately transformed to acute lymphocytic leukemia accompanied by a secondary cytogenetic anomaly of t(3;3)(q21;q26) and EVI1 rearrangement around 3 years after the diagnosis of 5q- syndrome. 23054648

2012

Entrez Id: 2122
Gene Symbol: MECOM
MECOM
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE We report a rare 5q- syndrome case which ultimately transformed to acute lymphocytic leukemia accompanied by a secondary cytogenetic anomaly of t(3;3)(q21;q26) and EVI1 rearrangement around 3 years after the diagnosis of 5q- syndrome. 23054648

2012

Entrez Id: 4869
Gene Symbol: NPM1
NPM1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE NPM1 deletion was an uncommon event in the "5q- syndrome" but occurred in over 40% of cases with high risk MDS/AML with complex karyotypes and 5q loss. 20877721

2010

Entrez Id: 3717
Gene Symbol: JAK2
JAK2
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE We performed a retrospective analysis of JAK2 V617F mutation in Chinese patients with myeloid neoplasms and isolated del(5q), and were able to demonstrate the frequent occurrence of JAK2 V617F mutation in 5q- syndrome. 19562618

2009

Entrez Id: 3342
Gene Symbol: HTC2
HTC2
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Our results show, for the first time that MSC from MDS display genomic aberrations, assessed by array-CGH and FISH, some of them specially linked to a particular MDS subtype, the 5q- syndrome. 19151777

2009

Entrez Id: 79628
Gene Symbol: SH3TC2
SH3TC2
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE The commonly deleted region of the 5q- syndrome extends between the genes SH3TC2 (proximal boundary) and GLRA1 (distal boundary) and measures 2.9 Mb. 18508791

2008

Entrez Id: 947
Gene Symbol: CD34
CD34
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE By analogy with DBA, we have investigated the expression profiles of a large group of ribosomal- and translation-related genes in the CD34(+) cells of 15 myelodysplastic syndrome (MDS) patients with 5q- syndrome, 18 MDS patients with refractory anaemia (RA) and a normal karyotype, and 17 healthy controls. 18477045

2008

Entrez Id: 7273
Gene Symbol: TTN
TTN
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Mitofilin and titin were identified as antigens against which antibodies were found exclusively in sera of MAR patients, but not in the sera of MM patients without MAR or healthy donors. 17131336

2007

Entrez Id: 4488
Gene Symbol: MSX2
MSX2
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Our study confirms that early fusion of cranial sutures commonly observed in the dup(5q) syndrome is caused by triplication of the MSX2 gene and strongly supports the crucial role of this gene in the development of craniofacial structures. 18000908

2007

Entrez Id: 929
Gene Symbol: CD14
CD14
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE In patients with early disease, only 2 out of 11 patients (18%) with RA or RARS, according to WHO classification, had clonal granulocytes and CD14(+) cells in peripheral blood and bone marrow and 2 other patients with 5q-syndrome exhibited extremely oligoclonal granulocyte subpopulation in bone marrow. 15725470

2005

Entrez Id: 308
Gene Symbol: ANXA5
ANXA5
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 AlteredExpression BEFREE We found lower levels of apoptosis in 5q-syndrome as detected by less disruption of mitochondrial potential (P=0.008) and decreased annexin V positivity (P=0.01). 12163050

2002

Entrez Id: 475
Gene Symbol: ATOX1
ATOX1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 Biomarker BEFREE Genomic localisation, function and expression would suggest that the HAH1 gene represents a candidate gene for the 5q-syndrome. 10982193

2000

Entrez Id: 6310
Gene Symbol: ATXN1
ATXN1
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE Physical mapping of the human ATX1 homologue (HAH1) to the critical region of the 5q- syndrome within 5q32, and immediately adjacent to the SPARC gene. 10982193

2000

Entrez Id: 3161
Gene Symbol: HMMR
HMMR
CUI: C0740302
Disease: 5q-syndrome
5q-syndrome
0.010 GeneticVariation BEFREE The map position of the human RHAMM gene places it in a region comparatively rich in disease-associated genes, including those for low-frequency hearing loss, dominant limb-girdle muscular dystrophy, diastrophic dysplasia, Treacher Collins syndrome, and myeloid disorders associated with the 5q- syndrome. 8595891

1995