Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 AlteredExpression BEFREE Furthermore, when levels of activated p21 ras were decreased in astrocytoma cells expressing the ras inhibitory Asn-17 dominant-negative mutant, levels of neurofibromin expression decreased. 8668337

1996

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE Collectively, our results suggest that loss of neurofibromin is not sufficient for astrocytoma formation in mice and that other genetic or environmental factors might influence NF1-associated glioma tumorigenesis. 12077339

2002

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 GeneticVariation BEFREE Analyzed astrocytomas without mutations in Ras or neurofibromin may harbor mutations in other proteins of this pathway leading to hyperactive Ras signaling. 17712732

2007

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE These results support a role for neurofibromin as the critical GAP in the molecular pathogenesis of NF1 astrocytomas. 11005256

2000

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 PosttranslationalModification BEFREE However, no methylation was found at the NF1 promoter region in PA. To rule out that silencing of NF1 by promoter methylation is restricted to higher-grade astrocytomas, 15 pediatric WHO II degree and IV degree astrocytomas were analyzed: 12 astrocytomas II and 3 glioblastomas displayed no NF1 promoter methylation. 15770836

2005

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE The algorithm measured significant increase in F-actin at cell edges with concomitant decrease in internal punctate actin in astrocytoma cells lacking functional neurofibromin and p53 when treated with three structurally-distinct anticancer small molecules: OSW1, Schweinfurthin A (SA) and a synthetic marine compound 23'-dehydroxycephalostatin 1. 24515854

2014

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE Impaired neurofibromin function in these nervous system cells contributes to the development of astrocytomas, learning disabilities, and radiographic abnormalities of the brain. 12403558

2002

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 Biomarker BEFREE Basic fibroblast growth factor and fibroblast growth factor receptor I are implicated in the growth of human astrocytomas. 7964981

1994

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE Transplantation of Trp53-null neonatal astrocytes expressing FGFR1 with the duplication involving the TKD into the brains of nude mice generated high-grade astrocytomas with short latency and 100% penetrance. 23583981

2013

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 GeneticVariation BEFREE Pediatric LGG show alterations in FGFR1 and BRAF in pilocytic astrocytomas and FGFR1 alterations in diffuse astrocytomas, each converging on the mitogen-activated protein kinase signaling pathway. 25664944

2015

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE High FGFR1 expression was associated with age, malignancy, tumor location and tumor grade among astrocytomas. 30931252

2019

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE Glioblastoma (the most malignant form of astrocytoma) cell lines, which exhibit the same pattern of FGFR gene expression as glioblastoma biopsies, were used to evaluate the contribution of FGFR1 expression to glioblastoma cell growth. 10498824

1999

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 AlteredExpression BEFREE Although SHP-1 is uniquely expressed on hematopoietic cells, SHP-2 is ubiquitously expressed, so that SIRPalpha1 has the potential to function in many cell types, including astrocytomas. 14729615

2004

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 Biomarker BEFREE The cellular response to the recombinant NS1 protein of West Nile virus (NS1<sup>WNV</sup>) was studied using three different cell types: Vero E6 simian epithelial cells, SH-SY5Y human neuroblastoma cells, and U-87MG human astrocytoma cells. 31569658

2019

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 Biomarker BEFREE The above results revealed that although the expression levels of SOCS1, SOCS3 and, in particular, p‑SHP2, tend to decrease in the four types of astrocytomas, PIAS3 downregulation is more negatively correlated with STAT3 activation in the stepwise progress of astrocytomas and would indicate an unfavorable outcome. 28035384

2017

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 Biomarker BEFREE To examine the potential immunostaining pattern of MGMT expression and to evaluate the possible relationship between p53 and MGMT regulation, we assessed MGMT and p53 accumulation on 35 cases of diffusely infiltrating astrocytomas. 14570288

2003

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Astrocytomas and choroid plexus tumors in two families with identical p53 germline mutations. 9825943

1998

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 AlteredExpression BEFREE The apoptotic index, proliferactive acitivity and the expression levels of p53 and its downstream genes, p21 and Cyclin D1, were evaluated in the C6 astrocytoma cells with overexpression or silencing of Axin. 19513548

2009

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 Biomarker BEFREE These findings implicate BRAF in the pathogenesis of these common low-grade astrocytomas in children, and suggest that PAs arise either from NF1 inactivation or BRAF gain of function. 19794125

2009

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Sequence analysis of tumor protein 53 gene (TP53) revealed a missense mutation in exon 5, and expression of phosphatase and tensin homolog (mutated in multiple advanced cancers 1) (PTEN) protein was not detected, which may have contributed to astrocytoma development. 16003541

2005

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Several investigations have searched a correlation between the BRAF gene fusions alterations and mutations at IDH1 and IDH2 genes in low grade pediatric astrocytomas. 24532263

2014

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Our previous and present data show alterations of at least one of TP53 promoter methylation, p14ARF promoter methylation, and TP53 mutations in 43/49 (88%) of low-grade astrocytomas, 15/18 (83%) of oligoastrocytomas, and 35/42 (83%) oligodendrogliomas, suggesting that disruption of the TP53/p14ARF pathway is frequent in all histological types of low-grade glioma. 16025287

2005

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE To examine this issue, we analyzed the significance of sequential accumulation of two somatic point mutations (R267W and E258D) in the TP53 gene during the initiation of astrocytoma in a patient born with a single germ-line p53 point mutation (R283H). 12019170

2002

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE TP53 mutations are significantly more frequent in low-grade astrocytomas with promoter methylation of the O(6)-methylguanine-DNA methyltransferase repair gene, suggesting that, in addition to deamination of 5-methylcytosine, exogenous or endogenous alkylation in the O(6) position of guanine may contribute to the formation of these mutations. 15685439

2005

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE However, the prognostic significance of TP53 loss of function in astrocytomas has always been controversial. 17457042

2007