Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE The algorithm measured significant increase in F-actin at cell edges with concomitant decrease in internal punctate actin in astrocytoma cells lacking functional neurofibromin and p53 when treated with three structurally-distinct anticancer small molecules: OSW1, Schweinfurthin A (SA) and a synthetic marine compound 23'-dehydroxycephalostatin 1. 24515854

2014

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 GeneticVariation BEFREE Analyzed astrocytomas without mutations in Ras or neurofibromin may harbor mutations in other proteins of this pathway leading to hyperactive Ras signaling. 17712732

2007

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 PosttranslationalModification BEFREE However, no methylation was found at the NF1 promoter region in PA. To rule out that silencing of NF1 by promoter methylation is restricted to higher-grade astrocytomas, 15 pediatric WHO II degree and IV degree astrocytomas were analyzed: 12 astrocytomas II and 3 glioblastomas displayed no NF1 promoter methylation. 15770836

2005

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE Collectively, our results suggest that loss of neurofibromin is not sufficient for astrocytoma formation in mice and that other genetic or environmental factors might influence NF1-associated glioma tumorigenesis. 12077339

2002

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE Impaired neurofibromin function in these nervous system cells contributes to the development of astrocytomas, learning disabilities, and radiographic abnormalities of the brain. 12403558

2002

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 Biomarker BEFREE These results support a role for neurofibromin as the critical GAP in the molecular pathogenesis of NF1 astrocytomas. 11005256

2000

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.480 AlteredExpression BEFREE Furthermore, when levels of activated p21 ras were decreased in astrocytoma cells expressing the ras inhibitory Asn-17 dominant-negative mutant, levels of neurofibromin expression decreased. 8668337

1996

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE High FGFR1 expression was associated with age, malignancy, tumor location and tumor grade among astrocytomas. 30931252

2019

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 GeneticVariation BEFREE Pediatric LGG show alterations in FGFR1 and BRAF in pilocytic astrocytomas and FGFR1 alterations in diffuse astrocytomas, each converging on the mitogen-activated protein kinase signaling pathway. 25664944

2015

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE Transplantation of Trp53-null neonatal astrocytes expressing FGFR1 with the duplication involving the TKD into the brains of nude mice generated high-grade astrocytomas with short latency and 100% penetrance. 23583981

2013

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 AlteredExpression BEFREE Glioblastoma (the most malignant form of astrocytoma) cell lines, which exhibit the same pattern of FGFR gene expression as glioblastoma biopsies, were used to evaluate the contribution of FGFR1 expression to glioblastoma cell growth. 10498824

1999

Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.450 Biomarker BEFREE Basic fibroblast growth factor and fibroblast growth factor receptor I are implicated in the growth of human astrocytomas. 7964981

1994

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 Biomarker BEFREE The cellular response to the recombinant NS1 protein of West Nile virus (NS1<sup>WNV</sup>) was studied using three different cell types: Vero E6 simian epithelial cells, SH-SY5Y human neuroblastoma cells, and U-87MG human astrocytoma cells. 31569658

2019

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 Biomarker BEFREE The above results revealed that although the expression levels of SOCS1, SOCS3 and, in particular, p‑SHP2, tend to decrease in the four types of astrocytomas, PIAS3 downregulation is more negatively correlated with STAT3 activation in the stepwise progress of astrocytomas and would indicate an unfavorable outcome. 28035384

2017

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.430 AlteredExpression BEFREE Although SHP-1 is uniquely expressed on hematopoietic cells, SHP-2 is ubiquitously expressed, so that SIRPalpha1 has the potential to function in many cell types, including astrocytomas. 14729615

2004

Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 Biomarker BEFREE In summary, our experiments elucidated that the HIF‑1α/miR‑224‑3p/ATG5 axis affects cell mobility and chemosensitivity by regulating hypoxia‑induced autophagy in glioblastoma and astrocytoma. 30569180

2019

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE The effect of allergy on survival was significant (p = 0.025, HR 0.525, 95% CI 0.299-0.924), independent of the effect of chromosome 1p (p < 0.001, HR 93.4, 95% CI 16-546) and 19q (p = 0.801, HR 1.2, 95% CI 0.23-6.9) codeletion or TP53 mutation (p = 0.015, HR 2.7, 95% CI 1.2-5.9), unrelated to TERT expression (p = 0.365, HR 1.1, 95% CI 0.89-1.4) or ATRX mutation (p = 0.904, HR 1.04, 95% CI 0.51-2.14), independent of tumor grade (grade 2 versus grade 3, p = 0.004, HR 2.2, 95% CI 1.3-3.8), not independent of histology (oligodendroglioma and oligoastrocytoma, NOS versus astrocytoma, p = 0.08, HR 0.62, 95% CI 0.36-1.1). 30611004

2019

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE ATRX and p53 mutation showed high spesificity (100% and 95.1% respectively) for diagnosing astrocytoma. 30592195

2019

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE In summary, high grade astrocytomas with BRAF V600E, ATRX, and CDKN2A/B alternations had unique clinicopathological features and may be a novel subset of high grade glioma. 30972500

2019

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Thus BRAF V600E mutation is common in desmoplastic non-infantile astrocytoma/ganglioglioma, but does not affect the prognosis. 29902580

2018

Entrez Id: 4318
Gene Symbol: MMP9
MMP9
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 AlteredExpression BEFREE The data indicate the possible action of ANXA1 and FPR2 on the development and progression of astrocytomas, related to increased expression of MMP-9. 30286327

2018

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 Biomarker BEFREE The relationship between survivin and p53 in diffuse astrocytic tumor progression and survival is currently unclear. 29374392

2018

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE Most tumors have a missense mutation for IDH1 combined with 1p19q codeletion in oligodendrogliomas or ATRX/TP53 mutations in astrocytomas. 29027701

2018

Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 AlteredExpression BEFREE The values of ADC, RSIGd, EP, EI, cellular density and the expression of HIF-1α were changed with the malignant degree of astrocytoma to some extent, but not every quantitative parameter was related to the expression of HIF-1α. 28006727

2017

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0004114
Disease: Astrocytoma
Astrocytoma
0.400 GeneticVariation BEFREE NGS data obtained in a retrospective analysis of 121 gliomas allowed for their molecular classification into distinct biological groups, including (i) isocitrate dehydrogenase gene (IDH) 1 or 2 mutant astrocytic gliomas with frequent α-thalassemia/mental retardation syndrome X-linked (ATRX) and tumor protein p53 (TP53) gene mutations, (ii) IDH mutant oligodendroglial tumors with 1p/19q codeletion, telomerase reverse transcriptase (TERT) promoter mutation and frequent Drosophila homolog of capicua (CIC) gene mutation, as well as (iii) IDH wildtype glioblastomas with frequent TERT promoter mutation, phosphatase and tensin homolog (PTEN) mutation and/or epidermal growth factor receptor (EGFR) amplification. 26919320

2017