Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57670
Gene Symbol: KIAA1549
KIAA1549
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE Hemorrhage was significantly present in cases of GG with KIAA1549-BRAF fusion, but no relevance was shown in cases with BRAF mutations. 31147232

2019

Entrez Id: 57670
Gene Symbol: KIAA1549
KIAA1549
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE In the third case, where the interval spanned multiple decades, the GG was found to be positive for both BRAF p.V600E immunohistochemistry (IHC) and for the KIAA1549-BRAF fusion. 31147230

2019

Entrez Id: 3417
Gene Symbol: IDH1
IDH1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE It is recognized that IDH mutation negative, low-grade epilepsy associated tumors (LEAT) can show diffuse growth patterns and lack the diagnostic hallmarks of either classical dysembryoplastic neuroepithelial tumors (DNT) or typical ganglioglioma. 29040640

2017

Entrez Id: 3417
Gene Symbol: IDH1
IDH1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE Their tumors showed distinctive features of ganglioglioma with low Ki-67 index (2%-4%), positive for the BRAF<sup>V600E</sup> mutation, but negative for IDH1/2 mutations. 27452969

2016

Entrez Id: 57670
Gene Symbol: KIAA1549
KIAA1549
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE Activation of the MAP Kinase (MAPK) pathway caused by the BRAFV600E mutation or the KIAA1549-BRAF fusion has been reported in pediatric GG and PA, respectively. 25524464

2014

Entrez Id: 3417
Gene Symbol: IDH1
IDH1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE In this multi-institutional study, 98 cases originally diagnosed as ganglioglioma were analyzed for IDH1 mutations, 86 of which had follow-up data available. 21314850

2011

Entrez Id: 27352
Gene Symbol: SGSM3
SGSM3
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Together, this study highlights that ganglioglioma is characterized by genetic alterations that activate the MAP kinase pathway, with only a small subset of cases that harbor additional pathogenic alterations such as CDKN2A deletion. 29880043

2018

Entrez Id: 1730
Gene Symbol: DIAPH2
DIAPH2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) are rare primary glioneuronal tumors that comprise 0.5% to 1.0% of all intracranial tumors. 29902580

2018

Entrez Id: 3976
Gene Symbol: LIF
LIF
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) are rare primary glioneuronal tumors that comprise 0.5% to 1.0% of all intracranial tumors. 29902580

2018

Entrez Id: 3418
Gene Symbol: IDH2
IDH2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE To identify potential molecular features predictive of brainstem ganglioglioma's clinical outcomes, a retrospective cohort of 28 World Health Organization (WHO) grade I brainstem gangliogliomas was analysed for BRAF V600E, IDH1 R132H, and IDH2 R172K mutations, TERT C228T/C250T promoter mutation, H3F3A K27M mutation and MGMT methylation. 28986151

2017

Entrez Id: 3418
Gene Symbol: IDH2
IDH2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE It is recognized that IDH mutation negative, low-grade epilepsy associated tumors (LEAT) can show diffuse growth patterns and lack the diagnostic hallmarks of either classical dysembryoplastic neuroepithelial tumors (DNT) or typical ganglioglioma. 29040640

2017

Entrez Id: 1730
Gene Symbol: DIAPH2
DIAPH2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) is a rare primary neuroepithelial brain tumour typically affecting paediatric patients younger than 24 months. 23822828

2014

Entrez Id: 27352
Gene Symbol: SGSM3
SGSM3
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Activation of the MAP Kinase (MAPK) pathway caused by the BRAFV600E mutation or the KIAA1549-BRAF fusion has been reported in pediatric GG and PA, respectively. 25524464

2014

Entrez Id: 3976
Gene Symbol: LIF
LIF
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) is a rare primary neuroepithelial brain tumour typically affecting paediatric patients younger than 24 months. 23822828

2014

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 AlteredExpression BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754

2003

Entrez Id: 7249
Gene Symbol: TSC2
TSC2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 Biomarker BEFREE The reelin signaling and tuberin/insulin growth receptor pathways have recently been implicated in ganglioglioma development. 12125736

2002

Entrez Id: 7249
Gene Symbol: TSC2
TSC2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE The selective detection of the TSC2 mutation within the glial component of a ganglioglioma suggests that the glioma portion has undergone clonal evolution in this case. 11437991

2001

Entrez Id: 947
Gene Symbol: CD34
CD34
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Ganglioglioma and pleomorphic xanthoastrocytoma were the histologic types with the strongest association with CD34 positivity with an odds ratio of 9.2 and 10.4, respectively, compared with dysembryoplastic neuroepithelial tumors. 30308344

2019

Entrez Id: 7248
Gene Symbol: TSC1
TSC1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 AlteredExpression BEFREE Ganglioglioma may be a phenotypic expression of TSC1. 29687738

2018

Entrez Id: 4915
Gene Symbol: NTRK2
NTRK2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE Novel TLE4-NTRK2 fusion in a ganglioglioma identified by array-CGH and confirmed by NGS: Potential for a gene targeted therapy. 29502353

2018

Entrez Id: 7091
Gene Symbol: TLE4
TLE4
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE Novel TLE4-NTRK2 fusion in a ganglioglioma identified by array-CGH and confirmed by NGS: Potential for a gene targeted therapy. 29502353

2018

Entrez Id: 65018
Gene Symbol: PINK1
PINK1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE We also review current literature data on involvement of parkin, DJ1 and PINK1 in the regulation of mTOR, the pathway probably contributing to the development of GG. 28803490

2018

Entrez Id: 5594
Gene Symbol: MAPK1
MAPK1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE miR-217-casein kinase-2 cross talk regulates ERK activation in ganglioglioma. 28840260

2017

Entrez Id: 238
Gene Symbol: ALK
ALK
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE We identified novel ALK fusions in a neuroblastoma (BEND5-ALK) and an astrocytoma (PPP1CB-ALK), novel BRAF fusions in an astrocytoma (BCAS1-BRAF) and a ganglioglioma (TMEM106B-BRAF), and a novel PAX3-GLI2 fusion in a rhabdomyosarcoma. 28069802

2017