Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 80856
Gene Symbol: LNPK
LNPK
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.400 Biomarker GENOMICS_ENGLAND Mutations in LNPK, Encoding the Endoplasmic Reticulum Junction Stabilizer Lunapark, Cause a Recessive Neurodevelopmental Syndrome. 30032983

2018

Entrez Id: 197258
Gene Symbol: FCSK
FCSK
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.400 Biomarker GENOMICS_ENGLAND Here we describe two unrelated individuals who have pathogenic variants in FUK and who presented with severe developmental delays, encephalopathy, intractable seizures, and hypotonia. 30503518

2018

Entrez Id: 80856
Gene Symbol: LNPK
LNPK
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.400 Biomarker HPO

Entrez Id: 197258
Gene Symbol: FCSK
FCSK
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.400 Biomarker HPO

Entrez Id: 51227
Gene Symbol: PIGP
PIGP
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Biallelic mutations in PIGP cause developmental and epileptic encephalopathy. 31139695

2019

Entrez Id: 6844
Gene Symbol: VAMP2
VAMP2
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Mutations in the Neuronal Vesicular SNARE VAMP2 Affect Synaptic Membrane Fusion and Impair Human Neurodevelopment. 30929742

2019

Entrez Id: 1822
Gene Symbol: ATN1
ATN1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND To distinguish this subset of affected individuals from the DRPLA diagnosis, we suggest using the term CHEDDA (congenital hypotonia, epilepsy, developmental delay, digit abnormalities) to classify the condition. 30827498

2019

Entrez Id: 1656
Gene Symbol: DDX6
DDX6
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Rare De Novo Missense Variants in RNA Helicase DDX6 Cause Intellectual Disability and Dysmorphic Features and Lead to P-Body Defects and RNA Dysregulation. 31422817

2019

Entrez Id: 1173
Gene Symbol: AP2M1
AP2M1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND A Recurrent Missense Variant in AP2M1 Impairs Clathrin-Mediated Endocytosis and Causes Developmental and Epileptic Encephalopathy. 31104773

2019

Entrez Id: 9488
Gene Symbol: PIGB
PIGB
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Mutations in PIGB Cause an Inherited GPI Biosynthesis Defect with an Axonal Neuropathy and Metabolic Abnormality in Severe Cases. 31256876

2019

Entrez Id: 5430
Gene Symbol: POLR2A
POLR2A
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND We conclude that subtle variants that are central in functionally important domains of POLR2A cause a neurodevelopmental syndrome characterized by profound infantile-onset hypotonia and developmental delay through a dominant-negative effect on pol-II-mediated transcription of DNA. 31353023

2019

Entrez Id: 1024
Gene Symbol: CDK8
CDK8
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND De Novo Missense Substitutions in the Gene Encoding CDK8, a Regulator of the Mediator Complex, Cause a Syndromic Developmental Disorder. 30905399

2019

Entrez Id: 80036
Gene Symbol: TRPM3
TRPM3
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND De novo substitutions of TRPM3 cause intellectual disability and epilepsy. 31278393

2019

Entrez Id: 6602
Gene Symbol: SMARCD1
SMARCD1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Here, we report on five individuals with mutations in SMARCD1; the individuals present with developmental delay, intellectual disability, hypotonia, feeding difficulties, and small hands and feet. 30879640

2019

Entrez Id: 26523
Gene Symbol: AGO1
AGO1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Integrative Analyses of De Novo Mutations Provide Deeper Biological Insights into Autism Spectrum Disorder. 29346770

2018

Entrez Id: 80036
Gene Symbol: TRPM3
TRPM3
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND The epilepsy phenotype in adult patients with intellectual disability and pathogenic copy number variants. 29156220

2017

Entrez Id: 5455
Gene Symbol: POU3F3
POU3F3
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND A de novo POU3F3 Deletion in a Boy with Intellectual Disability and Dysmorphic Features. 24550763

2014

Entrez Id: 81609
Gene Symbol: SNX27
SNX27
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.300 Biomarker GENOMICS_ENGLAND Loss of sorting nexin 27 contributes to excitatory synaptic dysfunction by modulating glutamate receptor recycling in Down's syndrome. 23524343

2013

Entrez Id: 513
Gene Symbol: ATP5F1D
ATP5F1D
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 CausalMutation CLINVAR Biallelic Mutations in ATP5F1D, which Encodes a Subunit of ATP Synthase, Cause a Metabolic Disorder. 29478781

2018

Entrez Id: 3708
Gene Symbol: ITPR1
ITPR1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 CausalMutation CLINVAR A novel splice site variant in ITPR1 gene underlying recessive Gillespie syndrome. 29663667

2018

Entrez Id: 8216
Gene Symbol: LZTR1
LZTR1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 CausalMutation CLINVAR Autosomal recessive Noonan syndrome associated with biallelic LZTR1 variants. 29469822

2018

Entrez Id: 10522
Gene Symbol: DEAF1
DEAF1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 GeneticVariation CLINVAR Exome analysis of Smith-Magenis-like syndrome cohort identifies de novo likely pathogenic variants. 28213671

2017

Entrez Id: 10522
Gene Symbol: DEAF1
DEAF1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 GeneticVariation CLINVAR Functional analysis of novel DEAF1 variants identified through clinical exome sequencing expands DEAF1-associated neurodevelopmental disorder (DAND) phenotype. 28940898

2017

Entrez Id: 2186
Gene Symbol: BPTF
BPTF
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 CausalMutation CLINVAR Haploinsufficiency of the Chromatin Remodeler BPTF Causes Syndromic Developmental and Speech Delay, Postnatal Microcephaly, and Dysmorphic Features. 28942966

2017

Entrez Id: 8506
Gene Symbol: CNTNAP1
CNTNAP1
CUI: C1858120
Disease: Generalized hypotonia
Generalized hypotonia
0.100 GeneticVariation CLINVAR Novel mutation in CNTNAP1 results in congenital hypomyelinating neuropathy. 27668699

2017