Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE The alleles IL-1β-31C and IL-1RN were associated with an increased risk of developing gastric carcinoma, and IL-1β-511T with an increased risk of developing chronic atrophic gastritis with no significant association of developing gastric carcinoma. 27340011

2016

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 AlteredExpression BEFREE Deficiency of claudin-18 causes paracellular H+ leakage, up-regulation of interleukin-1β, and atrophic gastritis in mice. 22079592

2012

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE IL1B-1464-G/C genotype was associated with lower incidence of AG in corpus of the stomach in Asians [odds ratio: 0.7 (95% confidence interval=0.5-0.8); P=0.02]. 20631624

2010

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE Interleukin-1beta (IL-1beta) polymorphisms are associated with peptic ulcer and atrophic gastritis. 19448967

2009

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE The aim of this study was to evaluate the relationship between IL1B and IL1 receptor antagonist gene polymorphisms and the risk of multifocal atrophic gastritis in African Americans and Caucasians. 16405550

2006

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE Proinflammatory IL-1 polymorphisms (IL-1RN*2(+)/IL-1B-511T/-31C(+)) were associated with increased IL-1beta expression, more severe degrees of inflammation, and an increased prevalence of IM and AG. 15247172

2004

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE We investigated the influence of bacterial virulence factors and host IL-1 polymorphisms on the development of histologic abnormalities in 210 Helicobacter pylori-infected patients with chronic gastritis. cagA(+)/vacAs1(+) H. pylori strains were associated with intestinal metaplasia (IM), atrophic gastritis (AG), and severe inflammation. 12854083

2003

Entrez Id: 3553
Gene Symbol: IL1B
IL1B
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.490 GeneticVariation BEFREE Proinflammatory IL-1beta polymorphisms are associated with hypochlorhydria and atrophic gastritis in Japan. 12105837

2002

Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.150 GeneticVariation BEFREE The alleles IL-1β-31C and IL-1RN were associated with an increased risk of developing gastric carcinoma, and IL-1β-511T with an increased risk of developing chronic atrophic gastritis with no significant association of developing gastric carcinoma. 27340011

2016

Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.150 GeneticVariation BEFREE IL1RN*2 allele was not linked with AG or intestinal metaplasia in all parts of the stomach both among Asians and Caucasians. 20631624

2010

Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.150 GeneticVariation BEFREE Moreover, the iceA2/IL-1B-511T and iceA2/IL-1B-31C/-511T/IL-1RN(*)2 bacteria/host genotype combinations showed a significant association with AG and L2/L3, respectively. 20482626

2010

Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.150 GeneticVariation BEFREE Proinflammatory IL-1 polymorphisms (IL-1RN*2(+)/IL-1B-511T/-31C(+)) were associated with increased IL-1beta expression, more severe degrees of inflammation, and an increased prevalence of IM and AG. 15247172

2004

Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.150 Biomarker BEFREE The highest prevalence of severe gastric abnormalities was found in patients with both host and bacterial high-risk genotypes (cagA(+)/vacAs1(+)/IL-1B -511T/IL-1RN*2), with ORs of 24.8 (95% CI, 5.2-117.3) for severe lymphocytic infiltration, 9.5 (95% CI, 2.8-32.1) for severe granulocytic infiltration, 6.0 (95% CI, 2.4-15.5) for IM, and 2.4 (95% CI, 0.93-6.2) for AG. 12854083

2003

Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.120 GeneticVariation BEFREE The present GWAS revealed the genetic locus of PSCA as the most significant locus for the risk of HP-induced GA, which confirmed the recently reported association in Europeans. 30753327

2019

Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.120 GeneticVariation BEFREE PSCA rs2294008 C>T polymorphism was assessed in H. pylori-positive Japanese patients (n = 488) with noncardia gastric cancer (n = 193), gastric ulcer (n = 84), duodenal ulcer (n = 61), and atrophic gastritis (n = 150), as well as in H. pylori-negatives (n = 266). 25582162

2015

Entrez Id: 999
Gene Symbol: CDH1
CDH1
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.110 PosttranslationalModification BEFREE Frequent hypermethylation including that of CDH1 in AM increased in the GC group compared to the AG group, and CDH1 methylation was an independent predictive marker of GC (OR: 8.50, 95% CI: 2.64-25.33, p = 0.0003). 29042646

2017

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.110 GeneticVariation BEFREE Among those participants with atrophic gastritis without metaplasia, 19.4% (6 of 25) contained KRAS mutations, indicating that mutation of this important gene is likely an early event in the etiology of gastric carcinoma. 10067815

1999

Entrez Id: 5225
Gene Symbol: PGC
PGC
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 GeneticVariation BEFREE Participants with atrophic gastritis (PGI < 30 μg/L or a PGI: PGII < 3.0) had shorter LTL than did those without: mean difference - 0.18 (95% CI - 0.32, - 0.04). 31331390

2019

Entrez Id: 2520
Gene Symbol: GAST
GAST
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 AlteredExpression BEFREE The aim of the study was to estimate the value of detecting pepsinogen (PG) I, PGII, and gastrin-17 (G-17) levels in serum for chronic atrophic gastritis (CAG) screening and to determine the clinical applicability of combined measurement of serum G-17, pepsinogens (PGI, PGII) and PGI/PGII ratio (PGR) as a screening test for CAG. 31058531

2019

Entrez Id: 5225
Gene Symbol: PGC
PGC
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 Biomarker BEFREE The aim of the study was to estimate the value of detecting pepsinogen (PG) I, PGII, and gastrin-17 (G-17) levels in serum for chronic atrophic gastritis (CAG) screening and to determine the clinical applicability of combined measurement of serum G-17, pepsinogens (PGI, PGII) and PGI/PGII ratio (PGR) as a screening test for CAG. 31058531

2019

Entrez Id: 2520
Gene Symbol: GAST
GAST
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 Biomarker BEFREE Pepsinogens, gastrin-17, and anti-H. pylori antibodies serum assays seem to be reliable non-invasive screening tools for the presence of CAG, helpful to identify individuals to refer to gastroscopy with five standard gastric biopsies in order to obtain histological confirmation of diagnosis. 31635944

2019

Entrez Id: 2520
Gene Symbol: GAST
GAST
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 AlteredExpression BEFREE NGR1 treatment significantly increased the levels of gastrin (GAS) and somatostatin (SS) and reduced motilin (MTL) in the serum of CAG rats. 30757999

2019

Entrez Id: 2520
Gene Symbol: GAST
GAST
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 AlteredExpression BEFREE The aim of this study was to investigate the effects of long-term PPIs use on the gastrin levels in patients with atrophic gastritis and to determine factors affecting hypergastrinemia in long-term users of PPIs. 29310112

2018

Entrez Id: 5225
Gene Symbol: PGC
PGC
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 GeneticVariation BEFREE We found 15 pairwise PGC-lncRNAs SNPs had interactions: Five pairs were associated with AG risk, and ten pairs were associated with GC risk. 30155999

2018

Entrez Id: 2520
Gene Symbol: GAST
GAST
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.100 AlteredExpression BEFREE Vonoprazan more markedly increased the blood gastrin level compared with conventional PPIs in patients with milder or no atrophic gastritis. 29393198

2018