Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10993994
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 30 2008 2019
dbSNP: rs4430796
rs4430796
HNF1B
0.790 0.280 17 37738049 intron variant A/G snv 0.52
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 18 2008 2018
dbSNP: rs137852578
rs137852578
AR
0.827 0.080 X 67723710 missense variant A/G snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 14 2002 2015
dbSNP: rs4792311
rs4792311
ELAC2
0.776 0.160 17 13011692 missense variant G/A;C snv 0.27
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.090 1.000 9 2002 2010
dbSNP: rs6983561
rs6983561
PCAT1 ; CASC19
0.925 0.080 8 127094635 intron variant A/C snv 0.17
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.780 1.000 9 2008 2017
dbSNP: rs4242382
rs4242382 		0.763 0.240 8 127505328 intergenic variant A/G;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 8 2008 2015
dbSNP: rs7501939
rs7501939
HNF1B
0.776 0.280 17 37741165 intron variant C/T snv 0.41
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 8 2008 2018
dbSNP: rs10090154
rs10090154 		0.807 0.160 8 127519892 intergenic variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.070 1.000 7 2008 2017
dbSNP: rs12653946
rs12653946
CTD-2194D22.4
0.882 0.080 5 1895715 intron variant C/T snv 0.43
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 7 2010 2013
dbSNP: rs7837688
rs7837688 		0.925 0.080 8 127527115 intergenic variant T/G snv 0.91
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.710 1.000 7 2007 2013
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 6 2010 2014
dbSNP: rs3787016
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.060 1.000 6 2011 2019
dbSNP: rs41341748
rs41341748
MSR1
0.827 0.120 8 16155085 stop gained G/A;C snv 8.3E-03; 2.8E-05
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.060 1.000 6 2004 2006
dbSNP: rs4242384
rs4242384 		0.882 0.160 8 127506309 regulatory region variant C/A snv 0.88
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 6 2008 2013
dbSNP: rs1048943
rs1048943
CYP1A1
0.533 0.720 15 74720644 missense variant T/A;C;G snv 0.11 5.9E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.050 1.000 5 2005 2019
dbSNP: rs10896449
rs10896449 		0.827 0.200 11 69227200 intergenic variant A/G snv 0.53
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 5 2008 2013
dbSNP: rs137852603
rs137852603
MXI1
1.000 0.080 10 110280017 missense variant A/C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 5 2008 2015
dbSNP: rs16901966
rs16901966
PCAT1 ; CASC19
0.925 0.080 8 127098007 intron variant A/G snv 0.13
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 1.000 5 2008 2016
dbSNP: rs1805087
rs1805087
MTR
0.496 0.800 1 236885200 missense variant A/G snv 0.20 0.21
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.050 1.000 5 2010 2018
dbSNP: rs587780194
rs587780194
CHEK2
1.000 0.080 22 28699866 missense variant T/A;C snv 1.6E-05
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 5 2008 2015
dbSNP: rs750984976
rs750984976
CHEK2
1.000 0.080 22 28699879 missense variant T/C;G snv 4.0E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 5 2008 2015
dbSNP: rs77130927
rs77130927
CHEK2
0.882 0.120 22 28725031 missense variant G/A snv 1.0E-03 5.5E-04
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 5 2008 2015
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 4 2008 2013
dbSNP: rs1050450
rs1050450
GPX1
0.623 0.600 3 49357401 missense variant G/A snv 0.28 0.30
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.040 1.000 4 2007 2014
dbSNP: rs11549467
rs11549467
HIF1A ; HIF1A-AS3
0.653 0.400 14 61740857 missense variant G/A snv 8.9E-03 7.0E-03
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.040 1.000 4 2007 2013