Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1057519991
rs1057519991
TP53
0.662 0.440 17 7675076 missense variant T/A;C;G snv 4.0E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2003 2003
dbSNP: rs764146326
rs764146326
TP53
0.662 0.480 17 7673779 missense variant C/A;G;T snv 4.0E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2003 2003
dbSNP: rs876659477
rs876659477
TP53
0.882 0.040 17 7673730 missense variant T/C snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2003 2003
dbSNP: rs2308321
rs2308321
MGMT
0.653 0.480 10 129766800 missense variant A/G snv 9.3E-02 8.7E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs2240308
rs2240308
AXIN2
0.701 0.360 17 65558473 missense variant G/A snv 0.47 0.39
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs747126003
rs747126003
IL6 ; IL6-AS1
0.689 0.400 7 22728790 missense variant A/G;T snv 4.0E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2007 2007
dbSNP: rs758272654
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs770460061
rs770460061
GSTP1
0.742 0.240 11 67585239 missense variant T/C;G snv 4.0E-06; 1.2E-05
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs1045485
rs1045485
CASP8
0.637 0.480 2 201284866 missense variant G/A;C;T snv 4.0E-06; 9.0E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 < 0.001 1 2010 2010
dbSNP: rs11540483
rs11540483
TAX1BP1
0.925 0.040 7 27787484 missense variant T/A snv 8.2E-02 7.7E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2010 2010
dbSNP: rs1222213359
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2010 2010
dbSNP: rs35385902
rs35385902
ADH1B ; ADH1C
0.807 0.240 4 99347122 missense variant C/A;T snv 2.0E-05; 1.1E-03
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2010 2010
dbSNP: rs1052133
rs1052133
OGG1 ; CAMK1
0.476 0.800 3 9757089 missense variant C/G snv 0.27 0.22
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.020 1.000 2 2011 2011
dbSNP: rs397507444
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.030 0.667 3 2009 2012
dbSNP: rs1183646267
rs1183646267
ATM
0.925 0.040 11 108281026 missense variant A/G snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs1297812518
rs1297812518
KLC1 ; XRCC3 ; LOC112268131
0.763 0.160 14 103707168 missense variant G/A snv 1.3E-05 1.4E-05
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs1573496
rs1573496
ADH7
0.827 0.160 4 99428512 missense variant C/G snv 8.5E-02; 4.9E-04 7.8E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs351855
rs351855
FGFR4
0.597 0.560 5 177093242 missense variant G/A snv 0.33 0.26
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs35431622
rs35431622
KISS1
0.851 0.120 1 204190794 missense variant T/A;C snv 5.5E-05; 4.7E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs397516436
rs397516436
TP53
0.641 0.440 17 7674894 stop gained G/A;C snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs698
rs698
ADH1B ; ADH1C
0.724 0.240 4 99339632 missense variant T/A;C snv 0.35
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs749710704
rs749710704
BHMT ; DMGDH
0.790 0.160 5 79119289 missense variant C/G;T snv 4.0E-06; 4.0E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs763015080
rs763015080
EDNRA
0.851 0.120 4 147539821 missense variant G/A snv 4.1E-06
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs786203436
rs786203436
TP53
0.701 0.280 17 7675125 missense variant A/C;G;T snv
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs1048943
rs1048943
CYP1A1
0.533 0.720 15 74720644 missense variant T/A;C;G snv 0.11 5.9E-02
CUI: C3887461
Disease: Head and Neck Carcinoma
Head and Neck Carcinoma 		0.020 < 0.001 2 2008 2013