Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2395173
rs2395173 		0.882 0.240 6 32437082 upstream gene variant A/G snv 0.62
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 4 2007 2011
dbSNP: rs2516049
rs2516049
HLA-DRB1
0.742 0.400 6 32602623 intergenic variant T/C snv 0.27
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 4 2007 2011
dbSNP: rs9268368
rs9268368
TSBP1 ; TSBP1-AS1
1.000 0.120 6 32366178 missense variant T/C snv 0.42 0.33
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 4 2007 2011
dbSNP: rs9268384
rs9268384
TSBP1 ; TSBP1-AS1
1.000 0.120 6 32368809 missense variant A/G snv 0.41 0.33
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 4 2007 2011
dbSNP: rs1003878
rs1003878
TSBP1 ; TSBP1-AS1
0.882 0.200 6 32332045 stop gained G/A snv 0.19 0.23
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs1033500
rs1033500
TSBP1 ; TSBP1-AS1
1.000 0.120 6 32339605 missense variant G/A snv 0.40 0.33
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs1042663
rs1042663
C2 ; CYP21A2 ; C2-AS1
0.925 0.160 6 31937353 synonymous variant G/A snv 9.7E-02 0.12
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs1794282
rs1794282 		0.807 0.320 6 32698749 intergenic variant C/T snv 6.4E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs1980493
rs1980493
BTNL2 ; TSBP1-AS1
0.776 0.400 6 32395438 intron variant T/C snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs206015
rs206015
NOTCH4
0.925 0.200 6 32214982 intron variant G/A snv 0.15
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2071295
rs2071295
TNXB
0.925 0.120 6 32070923 intron variant C/T snv 0.25
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2071554
rs2071554
HLA-DOB
0.925 0.200 6 32816899 missense variant C/A;T snv 4.1E-06; 6.2E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2072633
rs2072633
CFB ; CYP21A2 ; NELFE
0.807 0.320 6 31951801 3 prime UTR variant A/G snv 0.59
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2074488
rs2074488
HLA-B ; HLA-C
0.925 0.160 6 31272654 intron variant G/T snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2075800
rs2075800
HSPA1L
0.776 0.440 6 31810169 missense variant C/T snv 0.32 0.25
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2076537
rs2076537
TSBP1 ; TSBP1-AS1
0.925 0.200 6 32349858 non coding transcript exon variant G/A snv 0.37 0.42
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2239689
rs2239689
TNXB
0.925 0.120 6 32062507 intron variant G/A snv 0.33 0.25
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2239804
rs2239804
HLA-DRA
0.851 0.240 6 32443746 intron variant T/A;C snv 0.51
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2260000
rs2260000
PRRC2A
0.851 0.200 6 31625699 intron variant A/G snv 0.29
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2261033
rs2261033
PRRC2A
0.925 0.160 6 31635814 non coding transcript exon variant A/G snv 0.42
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2281829
rs2281829
UQCC2
1.000 0.120 6 33707865 intron variant A/G snv 0.40
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2395182
rs2395182
HLA-DRA
0.851 0.280 6 32445540 downstream gene variant G/T snv 0.76
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2395185
rs2395185
HLA-DRB9
0.724 0.360 6 32465390 intron variant G/T snv 0.29
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs241407
rs241407
LOC100294145
0.925 0.200 6 32894963 upstream gene variant C/T snv 9.7E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011