Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1800872
rs1800872
IL10 ; IL19
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.030 1.000 3 2011 2018
dbSNP: rs187084
rs187084
TLR9
0.641 0.480 3 52227015 intron variant A/G snv 0.38
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.030 1.000 3 2014 2018
dbSNP: rs11003125
rs11003125
MBL2
0.790 0.480 10 52772254 upstream gene variant G/C snv 0.31
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 0.500 2 2017 2019
dbSNP: rs1544410
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2017 2019
dbSNP: rs1800871
rs1800871
IL10 ; IL19
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2011 2018
dbSNP: rs1800896
rs1800896
IL10 ; IL19
0.507 0.800 1 206773552 intron variant T/C snv 0.41
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2016 2017
dbSNP: rs2275913
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2013 2016
dbSNP: rs2430561
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2016 2017
dbSNP: rs606231248
rs606231248
MRC1
0.882 0.080 10 17849701 missense variant G/A snv 0.32
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2012 2013
dbSNP: rs7095891
rs7095891
MBL2
0.882 0.120 10 52771701 upstream gene variant G/A snv 0.30
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2019 2019
dbSNP: rs7096206
rs7096206
MBL2
0.708 0.480 10 52771925 upstream gene variant G/A;C;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 0.500 2 2014 2019
dbSNP: rs897200
rs897200
STAT4
0.851 0.280 2 191153045 upstream gene variant T/C snv 0.54
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2014 2018
dbSNP: rs9939609
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.020 1.000 2 2014 2017
dbSNP: rs1010
rs1010
VAMP8
0.807 0.120 2 85581859 3 prime UTR variant T/C;G snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs10208770
rs10208770
SP110
1.000 0.080 2 230170151 intron variant T/G snv 0.14
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2014 2014
dbSNP: rs10421768
rs10421768
HAMP
0.807 0.120 19 35281996 intron variant A/G snv 0.21
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs10498244
rs10498244
SP110
1.000 0.080 2 230173117 non coding transcript exon variant T/C snv 0.26
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2014 2014
dbSNP: rs10499859
rs10499859
CD36
0.925 0.120 7 80629494 intron variant A/G snv 0.46
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs1050504
rs1050504
NSMAF
1.000 0.080 8 58583857 3 prime UTR variant C/T snv 0.24
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs10759931
rs10759931 		0.790 0.360 9 117701869 upstream gene variant G/A;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2015 2015
dbSNP: rs10759932
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs10841845
rs10841845
CLEC4E
0.925 0.200 12 8533837 3 prime UTR variant A/G snv 0.28
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs10841847
rs10841847
CLEC4E
1.000 0.080 12 8535216 intron variant A/G snv 0.58
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs10995271
rs10995271 		0.776 0.280 10 62678726 downstream gene variant G/C snv 0.32
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2014 2014
dbSNP: rs11168287
rs11168287
VDR
0.882 0.160 12 47891631 intron variant G/A snv 0.56
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2016 2016