Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10759931
rs10759931 		0.790 0.360 9 117701869 upstream gene variant G/A;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2015 2015
dbSNP: rs10995271
rs10995271 		0.776 0.280 10 62678726 downstream gene variant G/C snv 0.32
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2014 2014
dbSNP: rs1568952
rs1568952 		1.000 0.080 8 58799804 intergenic variant T/C snv 0.75
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2013 2013
dbSNP: rs2737190
rs2737190 		0.827 0.120 9 117701903 upstream gene variant G/A snv 0.52
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs4331426
rs4331426 		0.925 0.080 18 22610832 intergenic variant G/A snv 0.86
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 < 0.001 1 2016 2016
dbSNP: rs4788172
rs4788172 		0.925 0.120 16 29656932 regulatory region variant G/A snv 0.12
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2015 2015
dbSNP: rs6507226
rs6507226 		1.000 0.080 18 22611328 intergenic variant A/G snv 0.45
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2016 2016
dbSNP: rs7194886
rs7194886 		0.851 0.080 16 50691282 upstream gene variant C/T snv 0.38
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2012 2012
dbSNP: rs9271300
rs9271300 		1.000 0.080 6 32613805 intergenic variant C/G snv 0.54
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2018 2018
dbSNP: rs4988453
rs4988453
ACAA1 ; MYD88
0.851 0.200 3 38137763 upstream gene variant C/A;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs1042713
rs1042713
ADRB2
0.576 0.800 5 148826877 missense variant G/A snv 0.42 0.43
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs1042714
rs1042714
ADRB2
0.597 0.640 5 148826910 stop gained G/C;T snv 0.68
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs1800870
rs1800870
ALDH3A2
0.851 0.200 17 19649164 intron variant C/T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2011 2011
dbSNP: rs15493
rs15493
ARG2 ; GPHN ; VTI1B
1.000 0.080 14 67651415 missense variant C/G;T snv 9.2E-02 8.8E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2019 2019
dbSNP: rs56061981
rs56061981
ART3 ; CXCL10
0.851 0.120 4 76023632 intron variant C/T snv 7.6E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2018 2018
dbSNP: rs2072069
rs2072069
CCL13
0.925 0.120 17 34357972 intron variant G/A snv 0.47
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2015 2015
dbSNP: rs2280789
rs2280789
CCL5 ; LOC105371744
0.925 0.080 17 35879999 intron variant A/G snv 0.16
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2018 2018
dbSNP: rs1799864
rs1799864
CCR2
0.572 0.680 3 46357717 missense variant G/A snv 0.13 0.12
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2009 2009
dbSNP: rs373950030
rs373950030
CD209
0.882 0.080 19 7744967 missense variant C/T snv 2.0E-05 2.1E-05
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2009 2009
dbSNP: rs4804803
rs4804803
CD209
0.732 0.360 19 7747847 upstream gene variant A/G snv 0.26
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2014 2014
dbSNP: rs10499859
rs10499859
CD36
0.925 0.120 7 80629494 intron variant A/G snv 0.46
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs1194182
rs1194182
CD36
1.000 0.080 7 80602188 5 prime UTR variant G/C snv 0.53
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017
dbSNP: rs3211956
rs3211956
CD36
0.925 0.160 7 80674446 intron variant T/G snv 6.7E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 < 0.001 1 2017 2017
dbSNP: rs3092923
rs3092923
CD40LG
1.000 0.080 X 136659026 intron variant T/C snv 0.17 0.28
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2015 2015
dbSNP: rs2239751
rs2239751
CISH ; MAPKAPK3
0.882 0.120 3 50610457 5 prime UTR variant T/G snv 9.6E-02 7.1E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary 		0.010 1.000 1 2017 2017