Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2070600
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.020 1.000 2 2008 2014
dbSNP: rs1452231640
rs1452231640
POLB
1.000 0.080 8 42339015 missense variant T/C snv 4.0E-06
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs1799864
rs1799864
CCR2
0.572 0.680 3 46357717 missense variant G/A snv 0.13 0.12
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 < 0.001 1 2008 2008
dbSNP: rs2854746
rs2854746
IGFBP3
0.752 0.200 7 45921046 missense variant G/A;C;T snv 0.38
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs746782366
rs746782366
CBS
0.925 0.120 21 43072117 missense variant C/G;T snv 8.1E-06; 4.0E-06
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs756065494
rs756065494
MTR
0.925 0.120 1 236835605 missense variant A/G snv 2.8E-05
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs758900778
rs758900778
MUTYH
0.925 0.080 1 45333489 missense variant G/C snv 4.0E-06
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs763059810
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 < 0.001 1 2008 2008
dbSNP: rs766958673
rs766958673
CBS
0.851 0.120 21 43066293 missense variant C/G;T snv 4.0E-06
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs79777494
rs79777494
MUTYH
0.882 0.120 1 45334495 missense variant G/A snv 1.1E-03 4.9E-04
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs2294008
rs2294008
PSCA ; JRK
0.672 0.320 8 142680513 5 prime UTR variant C/T snv 0.46 0.45
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.800 0.971 31 2009 2019
dbSNP: rs2976392
rs2976392
PSCA ; JRK
0.724 0.240 8 142681514 3 prime UTR variant G/A snv 0.46 0.45
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.100 0.909 11 2009 2019
dbSNP: rs1042522
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.100 0.900 10 2009 2015
dbSNP: rs1131691014
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.080 0.875 8 2009 2015
dbSNP: rs878854066
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.080 0.875 8 2009 2015
dbSNP: rs1136410
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.050 0.800 5 2009 2014
dbSNP: rs17655
rs17655
ERCC5 ; BIVM-ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.050 0.800 5 2009 2018
dbSNP: rs1047768
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.030 0.667 3 2009 2017
dbSNP: rs1130409
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.030 1.000 3 2009 2013
dbSNP: rs2227869
rs2227869
ERCC5 ; BIVM-ERCC5
0.790 0.240 13 102862735 missense variant G/A;C snv 4.3E-02
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.020 1.000 2 2009 2017
dbSNP: rs2301756
rs2301756
PTPN11
0.851 0.120 12 112452972 intron variant A/G snv 0.21
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.020 0.500 2 2009 2016
dbSNP: rs4072111
rs4072111
IL16
0.716 0.400 15 81285798 missense variant C/T snv 0.17 0.11
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.020 1.000 2 2009 2016
dbSNP: rs746702110
rs746702110
OGG1
0.627 0.480 3 9756778 missense variant C/T snv 1.2E-05 2.8E-05
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.020 1.000 2 2009 2010
dbSNP: rs10434
rs10434
VEGFA
0.701 0.480 6 43785475 3 prime UTR variant A/G snv 0.59
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2009 2009
dbSNP: rs1047840
rs1047840
EXO1
0.708 0.280 1 241878999 missense variant G/A snv 0.36 0.40
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma 		0.010 1.000 1 2009 2009