Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9272346
rs9272346
HLA-DQA1
0.790 0.320 6 32636595 intron variant G/A snv 0.54
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 2 2007 2015
dbSNP: rs9272105
rs9272105
HLA-DQA1
0.925 0.120 6 32632222 intron variant G/A snv 0.55
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.810 1.000 1 2012 2015
dbSNP: rs9272346
rs9272346
HLA-DQA1
0.790 0.320 6 32636595 intron variant G/A snv 0.54
CUI: C0004096
Disease: Asthma
Asthma 		0.810 1.000 1 2012 2019
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.800 1.000 3 2008 2016
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0007570
Disease: Celiac Disease
Celiac Disease 		0.800 1.000 2 2007 2010
dbSNP: rs17843604
rs17843604
HLA-DQA1
0.925 0.120 6 32652506 intergenic variant C/T snv 0.49
CUI: C0004096
Disease: Asthma
Asthma 		0.800 1.000 1 2010 2019
dbSNP: rs2040406
rs2040406
HLA-DQA1
0.882 0.240 6 32635230 intron variant A/G snv 0.23
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.800 1.000 1 2010 2010
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0017665
Disease: Membranous glomerulonephritis
Membranous glomerulonephritis 		0.800 1.000 1 2011 2011
dbSNP: rs6927022
rs6927022
HLA-DQA1 ; LOC107986589
1.000 0.040 6 32644620 non coding transcript exon variant A/G snv 0.42
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 1.000 1 2012 2017
dbSNP: rs9272219
rs9272219
HLA-DQA1
0.925 0.160 6 32634492 intron variant G/T snv 0.29
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.800 1.000 1 2009 2009
dbSNP: rs9272535
rs9272535
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.827 0.280 6 32638979 synonymous variant G/A snv 3.0E-05 1.8E-03
CUI: C0023434
Disease: Chronic Lymphocytic Leukemia
Chronic Lymphocytic Leukemia 		0.800 1.000 1 2011 2011
dbSNP: rs9272143
rs9272143
HLA-DQA1
0.882 0.080 6 32633026 intron variant T/C snv 0.49
CUI: C4048328
Disease: cervical cancer
cervical cancer 		0.720 1.000 1 2013 2014
dbSNP: rs9272219
rs9272219
HLA-DQA1
0.925 0.160 6 32634492 intron variant G/T snv 0.29
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.710 1.000 2 2011 2014
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.700 1.000 2 2009 2012
dbSNP: rs114549185
rs114549185
HLA-DQA1
1.000 0.040 6 32633427 intron variant C/G snv 5.2E-02
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs114798579
rs114798579
HLA-DQA1
1.000 0.040 6 32629564 intron variant G/A snv 4.6E-02
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs13207922
rs13207922
HLA-DQA1
1.000 0.040 6 32628470 intron variant G/T snv 5.0E-02
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs13211715
rs13211715
HLA-DQA1
1.000 0.040 6 32632691 intron variant G/A snv 5.9E-02
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs13215343
rs13215343
HLA-DQA1
1.000 0.040 6 32633277 intron variant C/A;G snv 5.0E-02
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs147897616
rs147897616
HLA-DQA1 ; LOC107986589
1.000 0.040 6 32638205 intron variant -/A;G ins
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs17211510
rs17211510
HLA-DQA1
1.000 0.120 6 32634653 intron variant C/A snv 0.26
CUI: C1445957
Disease: Serum total cholesterol measurement
Serum total cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs17211510
rs17211510
HLA-DQA1
1.000 0.120 6 32634653 intron variant C/A snv 0.26
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs17843604
rs17843604
HLA-DQA1
0.925 0.120 6 32652506 intergenic variant C/T snv 0.49
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012
dbSNP: rs199889539
rs199889539
HLA-DQA1 ; LOC107986589
1.000 0.040 6 32637642 intron variant -/T ins
CUI: C0036202
Disease: Sarcoidosis
Sarcoidosis 		0.700 1.000 1 2012 2012