Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs780324684
rs780324684
LIG1
1.000 0.080 19 48128007 stop gained G/A;C;T snv 1.6E-05; 4.0E-06; 4.0E-06
CUI: C0009402
Disease: Colorectal Carcinoma
Colorectal Carcinoma 		0.700 0
dbSNP: rs780748107
rs780748107
LIG1 ; LOC107985293
1.000 0.080 19 48153884 missense variant T/C snv 4.7E-05 1.4E-05
CUI: C0009402
Disease: Colorectal Carcinoma
Colorectal Carcinoma 		0.700 0
dbSNP: rs156641
rs156641
LIG1
0.882 0.080 19 48128151 intron variant C/T snv 0.29
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs156641
rs156641
LIG1
0.882 0.080 19 48128151 intron variant C/T snv 0.29
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs156641
rs156641
LIG1
0.882 0.080 19 48128151 intron variant C/T snv 0.29
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.020 0.500 2 2008 2015
dbSNP: rs20579
rs20579
LIG1
0.882 0.080 19 48165573 5 prime UTR variant G/A;C snv 0.13
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs20579
rs20579
LIG1
0.882 0.080 19 48165573 5 prime UTR variant G/A;C snv 0.13
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs20579
rs20579
LIG1
0.882 0.080 19 48165573 5 prime UTR variant G/A;C snv 0.13
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.020 0.500 2 2008 2015
dbSNP: rs3730931
rs3730931
LIG1 ; LOC107985293
0.882 0.080 19 48143984 intron variant T/C snv 0.12 0.15
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs3730931
rs3730931
LIG1 ; LOC107985293
0.882 0.080 19 48143984 intron variant T/C snv 0.12 0.15
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.020 0.500 2 2008 2015
dbSNP: rs3730931
rs3730931
LIG1 ; LOC107985293
0.882 0.080 19 48143984 intron variant T/C snv 0.12 0.15
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs439132
rs439132
LIG1
0.882 0.080 19 48165657 intron variant T/C snv 5.6E-02 9.6E-02
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.020 0.500 2 2008 2015
dbSNP: rs439132
rs439132
LIG1
0.882 0.080 19 48165657 intron variant T/C snv 5.6E-02 9.6E-02
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs439132
rs439132
LIG1
0.882 0.080 19 48165657 intron variant T/C snv 5.6E-02 9.6E-02
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.020 0.500 2 2008 2015
dbSNP: rs20581
rs20581
LIG1
0.882 0.080 19 48119170 synonymous variant A/G snv 0.58 0.64
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.010 1.000 1 2008 2008
dbSNP: rs20581
rs20581
LIG1
0.882 0.080 19 48119170 synonymous variant A/G snv 0.58 0.64
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.010 1.000 1 2008 2008
dbSNP: rs20581
rs20581
LIG1
0.882 0.080 19 48119170 synonymous variant A/G snv 0.58 0.64
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.010 1.000 1 2008 2008
dbSNP: rs3730859
rs3730859
LIG1
0.882 0.080 19 48161802 intron variant G/A snv 0.30
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.010 1.000 1 2012 2012
dbSNP: rs3730859
rs3730859
LIG1
0.882 0.080 19 48161802 intron variant G/A snv 0.30
CUI: C0242379
Disease: Malignant neoplasm of lung
Malignant neoplasm of lung 		0.010 1.000 1 2012 2012
dbSNP: rs3730859
rs3730859
LIG1
0.882 0.080 19 48161802 intron variant G/A snv 0.30
CUI: C1306460
Disease: Primary malignant neoplasm of lung
Primary malignant neoplasm of lung 		0.010 1.000 1 2012 2012