Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3131379
rs3131379
MSH5 ; MSH5-SAPCD1
0.752 0.440 6 31753256 intron variant G/A snv 6.4E-02 7.9E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.810 1.000 2 2008 2016
dbSNP: rs1144709
rs1144709
MSH5 ; MSH5-SAPCD1 ; LOC105375020
6 31741572 intron variant C/T snv 0.37
CUI: C0596887
Disease: mathematical ability
mathematical ability 		0.700 1.000 1 2018 2018
dbSNP: rs149544854
rs149544854
MSH5 ; MSH5-SAPCD1
1.000 0.040 6 31755003 intron variant C/G;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.700 1.000 1 2017 2017
dbSNP: rs149544854
rs149544854
MSH5 ; MSH5-SAPCD1
1.000 0.040 6 31755003 intron variant C/G;T snv
CUI: C0008074
Disease: Child Development Disorders, Pervasive
Child Development Disorders, Pervasive 		0.700 1.000 1 2017 2017
dbSNP: rs17207524
rs17207524
MSH5 ; MSH5-SAPCD1
6 31759073 intron variant G/T snv 4.2E-02 6.9E-02
CUI: C0018498
Disease: Hair Color
Hair Color 		0.700 1.000 1 2018 2018
dbSNP: rs17207524
rs17207524
MSH5 ; MSH5-SAPCD1
6 31759073 intron variant G/T snv 4.2E-02 6.9E-02
CUI: C2985280
Disease: Blood Protein Measurement
Blood Protein Measurement 		0.700 1.000 1 2018 2018
dbSNP: rs1802127
rs1802127
MSH5 ; SAPCD1 ; MSH5-SAPCD1
6 31762148 missense variant C/T snv 3.0E-02 5.1E-02
CUI: C0202075
Disease: 17 Hydroxyprogesterone measurement
17 Hydroxyprogesterone measurement 		0.700 1.000 1 2019 2019
dbSNP: rs28399987
rs28399987
MSH5 ; SAPCD1 ; MSH5-SAPCD1
1.000 0.080 6 31762974 3 prime UTR variant G/A snv 6.5E-03
CUI: C0039263
Disease: Takayasu Arteritis
Takayasu Arteritis 		0.700 1.000 1 2015 2015
dbSNP: rs3131378
rs3131378
MSH5 ; MSH5-SAPCD1
0.925 0.200 6 31757508 non coding transcript exon variant A/G snv 7.9E-02
CUI: C0684249
Disease: Carcinoma of lung
Carcinoma of lung 		0.700 1.000 1 2017 2017
dbSNP: rs409558
rs409558
MSH5 ; MSH5-SAPCD1 ; LOC105375020
6 31740370 5 prime UTR variant T/C snv 0.21
CUI: C0871470
Disease: Systolic Pressure
Systolic Pressure 		0.700 1.000 1 2016 2016
dbSNP: rs409558
rs409558
MSH5 ; MSH5-SAPCD1 ; LOC105375020
6 31740370 5 prime UTR variant T/C snv 0.21
CUI: C0577608
Disease: C4 complement assay (procedure)
C4 complement assay (procedure) 		0.700 1.000 1 2017 2017
dbSNP: rs707938
rs707938
MSH5 ; SAPCD1 ; MSH5-SAPCD1
6 31761582 synonymous variant A/G snv 0.38 0.44
CUI: C0021704
Disease: Intelligence
Intelligence 		0.700 1.000 1 2018 2018
dbSNP: rs707938
rs707938
MSH5 ; SAPCD1 ; MSH5-SAPCD1
6 31761582 synonymous variant A/G snv 0.38 0.44
CUI: C1314691
Disease: Age at menarche
Age at menarche 		0.700 1.000 1 2018 2018
dbSNP: rs707938
rs707938
MSH5 ; SAPCD1 ; MSH5-SAPCD1
6 31761582 synonymous variant A/G snv 0.38 0.44
CUI: C1629609
Disease: Age at menopause
Age at menopause 		0.700 1.000 1 2015 2015
dbSNP: rs707939
rs707939
MSH5 ; MSH5-SAPCD1
0.851 0.200 6 31758911 intron variant C/A snv 0.34 0.26
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.700 1.000 1 2017 2017
dbSNP: rs707939
rs707939
MSH5 ; MSH5-SAPCD1
0.851 0.200 6 31758911 intron variant C/A snv 0.34 0.26
CUI: C0008074
Disease: Child Development Disorders, Pervasive
Child Development Disorders, Pervasive 		0.700 1.000 1 2017 2017