Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10811661
rs10811661
CUI: C0011847
Disease: Diabetes
Diabetes
0.030 GeneticVariation BEFREE There were potential interactions among CDKN2A/2B (rs10811661) - FTO (rs7195539) or FTO (rs7195539)-TG-HDL-family history of diabetes in the pathogenesis of T2D in a Uyghur population. 26873362

2016

dbSNP: rs10811661
rs10811661
CUI: C0011847
Disease: Diabetes
Diabetes
0.030 GeneticVariation BEFREE Pooling our results with those reported by the PROCARDIS group, we also obtained a significant result of association with diabetes for rs10811661 in the European population. 20403154

2010

dbSNP: rs10811661
rs10811661
CUI: C0011847
Disease: Diabetes
Diabetes
0.030 GeneticVariation BEFREE Islets from donors without diabetes (<i>n</i> = 95) were tested for SNP genotype (rs10811661, rs2383208, rs564398, and rs10757283), gene expression (<i>p14</i>, <i>p15</i>, <i>p16</i>, <i>MTAP</i>, <i>ANRIL</i>, <i>PCNA</i>, <i>KI67</i>, and <i>CCND2</i>), insulin secretion (<i>n</i> = 61), and β-cell proliferation (<i>n</i> = 47). 29432124

2018

dbSNP: rs7172432
rs7172432
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE In the Danish MONICA study four gene variants were significantly associated with incident CVD independently of known diabetes status at baseline; SLC2A2 rs11920090 (HR 1.147, 95% CI 1.027-1.283 , P = 0.0154), C2CD4A rs7172432 (1.112, 1.027-1.205 , P = 0.0089), GCKR rs780094 (1.094, 1.007-1.188 , P = 0.0335) and C2CD4B rs11071657 (1.092, 1.007-1.183 , P = 0.0323). 23185617

2012

dbSNP: rs7172432
rs7172432
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE We genotyped the rs7172432 variant in the population-based Inter99 cohort (n = 6,784) and analysed quantitative diabetes-related traits in 5,722 non-diabetic participants who all were examined by an OGTT. 21249489

2011

dbSNP: rs2327832
rs2327832
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE Three single nucleotide polymorphisms were associated with increased diabetes risk (rs10517086_A [<i>P</i> = 0.03], rs1534422_G [<i>P</i> = 0.006], and rs2327832_G [<i>P</i> = 0.03] in <i>TNFAIP3</i>) and one with decreased risk (rs1004446_A in <i>INS</i> [<i>P</i> = 0.006]). 28903990

2017

dbSNP: rs2327832
rs2327832
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE Moreover, we identify the single nucleotide polymorphism rs2327832 of TNFAIP3 as a possible prognostic marker for diabetes outcome in children with T1D. 26652732

2016

dbSNP: rs17782313
rs17782313
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE We tested the hypothesis that the ADRB2rs1800888(Thr164Ile) polymorphism associates with risk of obesity and diabetes and compared effect sizes with those of FTO(rs9939609), MC4R(rs17782313), and TMEM18(rs6548238). 22466342

2012

dbSNP: rs17782313
rs17782313
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE We examined the associations of the reported variants rs17782313 (T>C) and rs17700633 (G>A) with dietary intakes, weight change and diabetes risk in 5724 women (1533 with type 2 diabetes) from a prospective cohort. 18697794

2008

dbSNP: rs12779790
rs12779790
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE Another diabetes susceptibility locus (rs12779790) located between the calcium/calmodulin-dependent protein kinase ID (CAMK1D) and cell division cycle 123 homolog (CDC123) genes is also associated with both macroscopic (OR = 1.40, p = 0.0292) and microscopic infarcts (OR = 1.43, p = 0.0285). 24135527

2013

dbSNP: rs12779790
rs12779790
CUI: C0011847
Disease: Diabetes
Diabetes
0.020 GeneticVariation BEFREE Homozygous carriers of the minor diabetes risk G-allele of the CDC123/CAMK1D rs12779790 showed an 18% decrease in insulinogenic index (95% CI 10-27%; P = 4 x 10(-5)), an 18% decrease in corrected insulin response (CIR) (8.1-29%; P = 4 x 10(-4)), and a 13% decrease in the ratio of area under the serum-insulin and plasma-glucose curves during an OGTT (AUC-insulin/AUC-glucose) (5.8-20%; P = 4 x 10(-4)). 18567820

2008

dbSNP: rs944289
rs944289
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE We also observed an interaction (P = 0.029; OR = 2.578, 95% CI = 1.104 - 6.023) between rs944289 and diabetes in patients with PTC. 24452548

2014

dbSNP: rs9402571
rs9402571
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE The rs9402571 SGK genotype associates with increased insulin secretion in lean non-diabetic TUEF/EUGENE2 participants and with lower diabetes prevalence in METSIM. 18985156

2008

dbSNP: rs8099917
rs8099917
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Univariate analysis revealed that, compared to patients without advanced liver fibrosis, patients with advanced liver fibrosis (Metavir fibrosis score 3-4) had an older age, a lower platelet count, a higher α-fetoprotein level, a higher alanine aminotransferase level, a higher incidence of diabetes, and a higher frequency of rs8099917 non-TT genotype carriage.Logistic regression analysis revealed that factors significantly associated with advanced liver fibrosis included age (odds ratio [OR]/95% confidence interval [CI]: 1.023/1.009-1.037, P = .001), diabetes (OR/CI: 1.736/1.187-2.539, P = .004), α-fetoprotein (OR/CI: 1.007/1.002-1.012, P = .009), platelet count (OR/CI: 0.991/0.988-0.993, P < .001), and carriage of the rs8099917 non-TT genotype (OR/CI: 0.585/0.400-0.856, P = .006). 29517696

2018

dbSNP: rs7936247
rs7936247
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Compared with women with a family history of diabetes, there was a significant association of rs7936247 with GDM risk among pregnant women without a family history of diabetes (OR 1.20; 95% CI 1.04-1.38; P = 0.014; P<sub>heterogeneity</sub>  = 0.035). 30912250

2019

dbSNP: rs7923837
rs7923837
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE T2D-related variants HHEX rs7923837, TCF7L2 rs290481 and CDKAL1 rs7756992 increased cancer risk in patients with diabetes. 24468095

2014

dbSNP: rs7910977
rs7910977
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Haplotype CT from rs6583813-rs7910977 was protective against diabetes (P=0.02). 24477584

2014

dbSNP: rs7193788
rs7193788
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE There was an interaction between rs7193788 and diabe</span>tes (P = 0.036). 28245897

2017

dbSNP: rs6834314
rs6834314
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE We used instrumental variable analysis based on two single nucleotide polymorphism (SNPs) HSD17B13/MAPK10 (rs6834314) and PNPLA3/SAMM50 (rs738409) to assess the associations of ALT (U/L) with IHD, diabetes and other CVD risk factors in the Guangzhou Biobank Cohort Study (GBCS). 28007909

2017

dbSNP: rs675209
rs675209
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Model covariates, age (P = 5.95E-06), sex (P = 2.46E-39), diabetes (P = 2.34E-07), BMI (P = 1.14E-11) and the SNPs, rs1967017 (P = 9.54E-03), rs13129697 (P = 4.34E-07), rs2199936 (P = 7.28E-03) and rs675209 (P = 4.84E-02) were all associated with incident gout. 26427508

2016

dbSNP: rs6681231
rs6681231
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE The rare G allele of htSNP rs6681231 was associated with aggressive periodontitis prior to and after adjustment for the covariates smoking, diabetes, and gender, with an odds ratio of 1.57 (95% confidence interval 1.18-2.08; p = 0.002). 20177132

2010

dbSNP: rs6583813
rs6583813
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Haplotype CT from rs6583813-rs7910977 was protective against diabetes (P=0.02). 24477584

2014

dbSNP: rs6564851
rs6564851
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE We next used a triangulation approach to estimate the expected effect of rs6564851 on type 2 diabetes risk and compared this with the observed effect using data from 4549 type 2 diabetes patients and 5579 controls from the Diabetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium. 19662379

2009

dbSNP: rs6548238
rs6548238
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE We tested the hypothesis that the ADRB2rs1800888(Thr164Ile) polymorphism associates with risk of obesity and diabetes and compared effect sizes with those of FTO(rs9939609), MC4R(rs17782313), and TMEM18(rs6548238). 22466342

2012

dbSNP: rs6499863
rs6499863
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE Three SNPs, at CETP, KLF14 and HNF4A, associated with type 2 diabetes only in female participants with the HDL-C-lowering allele increasing diabetes risk (p values: 3.2 × 10(-4) to 7.7 × 10(-5)); the association remained significant even after adjustment for HDL-C. Additional analysis across CETP identified rs6499863 as having the strongest association with type 2 diabetes in female participants (p = 5.0 × 10(-6)) and this association remained independent of the HDL-C association. 26670163

2016