Source: ALL

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7023329
rs7023329
MTAP
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASCAT Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs7023329
rs7023329
MTAP
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASDB Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs7023329
rs7023329
MTAP
CUI: C0025202
Disease: melanoma
melanoma 		A 0.810 GeneticVariation GWASDB Genome-wide association study identifies three loci associated with melanoma risk. 19578364

2009
dbSNP: rs4698934
rs4698934
TET2 ; TET2-AS1
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation BEFREE The SNP rs4698934 was nominally significantly associated with melanoma risk. 24980573

2014
dbSNP: rs4698934
rs4698934
TET2 ; TET2-AS1
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASDB The SNP rs4698934 was nominally significantly associated with melanoma risk. 24980573

2014
dbSNP: rs4698934
rs4698934
TET2 ; TET2-AS1
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASCAT The SNP rs4698934 was nominally significantly associated with melanoma risk. 24980573

2014
dbSNP: rs1801516
rs1801516
ATM
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation BEFREE Finally, rs1801516, located on the ATM gene, showed a trend towards a protective role in MM similar to the one firstly described in a GWAS study. 23537197

2013
dbSNP: rs1801516
rs1801516
ATM
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASDB Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs1801516
rs1801516
ATM
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASCAT Two-stage genome-wide association study identifies a novel susceptibility locus associated with melanoma. 28212542

2017
dbSNP: rs1801516
rs1801516
ATM
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASCAT Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs17119461
rs17119461
LINC02627
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation BEFREE In the PanScan data, initial associations were found with melanoma susceptibility variants in NCOA6 [rs4911442; OR, 1.32; 95% confidence interval (CI), 1.03-1.70; P = 0.03], YWHAZP5 (rs17119461; OR, 2.62; 95% CI, 1.08-6.35; P = 0.03), and YWHAZP5 (rs17119490; OR, 2.62; 95% CI, 1.08-6.34; P = 0.03), TYRP1 (P = 0.04), and IFNA13 (P = 0.04). 24642353

2014
dbSNP: rs17119461
rs17119461
LINC02627
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASDB A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q. 21706340

2012
dbSNP: rs17119461
rs17119461
LINC02627
CUI: C0025202
Disease: melanoma
melanoma 		0.810 GeneticVariation GWASCAT A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q. 21706340

2012
dbSNP: rs7412746
rs7412746
CTXND2
CUI: C0025202
Disease: melanoma
melanoma 		T 0.800 GeneticVariation GWASDB Genome-wide association study identifies a new melanoma susceptibility locus at 1q21.3. 21983785

2011
dbSNP: rs7412746
rs7412746
CTXND2
CUI: C0025202
Disease: melanoma
melanoma 		T 0.800 GeneticVariation GWASCAT Two-stage genome-wide association study identifies a novel susceptibility locus associated with melanoma. 28212542

2017
dbSNP: rs7412746
rs7412746
CTXND2
CUI: C0025202
Disease: melanoma
melanoma 		T 0.800 GeneticVariation GWASCAT Genome-wide association study identifies a new melanoma susceptibility locus at 1q21.3. 21983785

2011
dbSNP: rs4785763
rs4785763
AFG3L1P
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASCAT Genome-wide association study identifies three loci associated with melanoma risk. 19578364

2009
dbSNP: rs4785763
rs4785763
AFG3L1P
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASCAT Two-stage genome-wide association study identifies a novel susceptibility locus associated with melanoma. 28212542

2017
dbSNP: rs4785763
rs4785763
AFG3L1P
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASDB Genome-wide association study identifies three loci associated with melanoma risk. 19578364

2009
dbSNP: rs35390
rs35390
SLC45A2
CUI: C0025202
Disease: melanoma
melanoma 		0.800 GeneticVariation GWASDB Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs35390
rs35390
SLC45A2
CUI: C0025202
Disease: melanoma
melanoma 		0.800 GeneticVariation GWASCAT Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011
dbSNP: rs258322
rs258322
CDK10
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASCAT Genome-wide association study identifies three loci associated with melanoma risk. 19578364

2009
dbSNP: rs258322
rs258322
CDK10
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASCAT Two-stage genome-wide association study identifies a novel susceptibility locus associated with melanoma. 28212542

2017
dbSNP: rs258322
rs258322
CDK10
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASDB Identification of a melanoma susceptibility locus and somatic mutation in TET2. 24980573

2014
dbSNP: rs258322
rs258322
CDK10
CUI: C0025202
Disease: melanoma
melanoma 		A 0.800 GeneticVariation GWASDB Genome-wide association study identifies three new melanoma susceptibility loci. 21983787

2011