Source: ALL

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2900180
rs2900180
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
A 0.830 GeneticVariation GWASCAT Studying the effects of haplotype partitioning methods on the RA-associated genomic results from the North American Rheumatoid Arthritis Consortium (NARAC) dataset. 30891314

2019

dbSNP: rs2900180
rs2900180
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.830 GeneticVariation BEFREE This meta-analysis confirms that the TRAF1-C5 rs10818488, rs3761847, rs2900180 and rs10760130 polymorphisms are associated with RA susceptibility in Europeans. 24144456

2014

dbSNP: rs2900180
rs2900180
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.830 GeneticVariation BEFREE This represents the second independent study correlating rs2900180 at the TRAF1 locus with radiological severity in RA. 23242182

2013

dbSNP: rs2900180
rs2900180
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.830 GeneticVariation BEFREE The aim of this study was to determine the influence of STAT4 (rs7574865) and TRAF1/C5 (rs10818488 and rs2900180) gene polymorphisms on the risk of developing rheumatoid arthritis (RA) and systemic lupus erythematosus (SLE) in a Colombian population. 18432273

2008

dbSNP: rs2900180
rs2900180
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.830 GeneticVariation GWASDB TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study. 17804836

2007

dbSNP: rs387906554
rs387906554
CUI: C0343047
Disease: Complement component 5 deficiency
Complement component 5 deficiency
C 0.700 CausalMutation CLINVAR

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE Lack of association between single nucleotide polymorphism rs10818488 in TRAF1/C5 region and rheumatoid arthritis in iranian population. 24338224

2014

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE This meta-analysis confirms that the TRAF1-C5 rs10818488, rs3761847, rs2900180 and rs10760130 polymorphisms are associated with RA susceptibility in Europeans. 24144456

2014

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE Meta-analysis showed a weak association between TRAF1/C5 r</span>s10818488 polymorphism and RA in all subjects (OR = 1.13, 95 % CI = 1.01–1.27, P heterogeneity < 0.001). 24234752

2014

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE Taken together, our study demonstrates that the TRAF1/C5 polymorphism (rs10818488) may confer susceptibility to RA in North Africa population, and in European population, it might be a contributory factor towards SLE. 23321589

2013

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE Interestingly, alleles rs3761847 A and rs10818488 G had increased the risk for RA in the present study, while they decreased the risk in the original studies. 19336421

2010

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE We genotyped the two most significant single nucleotide polymorphisms (SNPs) (rs10818488, rs2416808) from a former RA candidate gene study. 20030635

2010

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE No statistically significant association of TRAF1/C5 SNPs rs3761847 and rs10818488 with RA was detected. 19445664

2009

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE The aim of this study was to determine the influence of STAT4 (rs7574865) and TRAF1/C5 (rs10818488 and rs2900180) gene polymorphisms on the risk of developing rheumatoid arthritis (RA) and systemic lupus erythematosus (SLE) in a Colombian population. 18432273

2008

dbSNP: rs10818488
rs10818488
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.090 GeneticVariation BEFREE We found that mutated allele A or genotypes A/A and G/A of the TRAF1/C5 rs10818488 SNP were more common in individuals with RA than in control individuals (odds ratio [OR]=1.7, 95% confidence interval [CI]=1.35-2.15, and OR=2.22, 95% CI=1.61-3.05, respectively). 18625278

2008

dbSNP: rs10818488
rs10818488
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
0.050 GeneticVariation BEFREE Association study of TRAF1/C5 polymorphism (rs10818488) with susceptibility to rheumatoid arthritis and systemic lupus erythematosus: a meta-analysis. 23321589

2013

dbSNP: rs10818488
rs10818488
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
0.050 GeneticVariation BEFREE An association was found between the rs10818488 polymorphism of TRAF1-C5 and susceptibility to SLE in Europeans. 22820624

2012

dbSNP: rs10818488
rs10818488
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
0.050 GeneticVariation BEFREE We investigated whether a single nucleotide polymorphism (SNP) of the STAT4 (rs7574865), PTPN22 (rs2476601), TRAF1/C5 (rs10818488), and C1q (rs292001) genes as well as the 27-bp VNTR polymorphism on intron 4 of eNOS, previously associated with SLE in other populations, are also associated with SLE risk in Turkey. 21968398

2011

dbSNP: rs10818488
rs10818488
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
0.050 GeneticVariation BEFREE A significant association was detected between the rs10818488 A allele and T1D (OR 1.14, p=0.027) and SLE (OR 1.16, p=0.016), which was replicated in 99 patients with T1D, 272 with SLE and 482 controls from Crete (OR 1.64, p=0.002; OR 1.43, p=0.002, respectively). 19433411

2010

dbSNP: rs10818488
rs10818488
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic
0.050 GeneticVariation BEFREE The aim of this study was to determine the influence of STAT4 (rs7574865) and TRAF1/C5 (rs10818488 and rs2900180) gene polymorphisms on the risk of developing rheumatoid arthritis (RA) and systemic lupus erythematosus (SLE) in a Colombian population. 18432273

2008

dbSNP: rs2416808
rs2416808
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.020 GeneticVariation BEFREE Similar findings were observed for rs2416808 susceptible genotype GG in the non-RA cohort (HR 0.99; 95%CI 0.79 to 1.25 and HR 0.89; 95%CI 0.64 to 1.25, respectively). 20205706

2010

dbSNP: rs2416808
rs2416808
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.020 GeneticVariation BEFREE We genotyped the two most significant single nucleotide polymorphisms (SNPs) (rs10818488, rs2416808) from a former RA candidate gene study. 20030635

2010

dbSNP: rs10818488
rs10818488
CUI: C0338437
Disease: Neurocysticercosis
Neurocysticercosis
0.010 GeneticVariation BEFREE This work aimed to study the possible relevance for human neurocysticercosis of single nucleotide polymorphisms (SNPs) in the C5-<i>TRAF1</i> region (rs17611 <i>C/T</i>, rs992670 <i>G/A</i>, rs25681 <i>G/A</i>, rs10818488 <i>A/G</i>, and rs3761847 <i>G/A</i>) in a Mexican population and associated with clinical and radiological traits related to neurocysticercosis severity (cell count in the cerebrospinal fluid [CSF cellularity], parasite location and parasite load in the brain, parasite degenerating stage, and epilepsy). 31570557

2019

dbSNP: rs10818488
rs10818488
CUI: C0014544
Disease: Epilepsy
Epilepsy
0.010 GeneticVariation BEFREE The rs3761847 SNP was associated with epilepsy under a dominant model, whereas rs10818488 was associated with CSF cellularity and parasite load under dominant and recessive models, respectively. 31570557

2019

dbSNP: rs10818488
rs10818488
CUI: C0018213
Disease: Graves Disease
Graves Disease
0.010 GeneticVariation BEFREE Allele analysis found that T allele of rs4836834, G allele of rs10760130, A allele of rs10818488, T allele of rs2239658 and T allele of rs2900180 were significantly higher in GD and AITD patients. 26699338

2016