Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2853578
rs2853578
CUI: C0039292
Disease: Tangier Disease
Tangier Disease
0.810 GeneticVariation BEFREE Previously, we showed that an ABCA1 Q597R mutant (QR) identified in TD is retained in the endoplasmic reticulum. 18343215

2008

dbSNP: rs1883025
rs1883025
CUI: C0242383
Disease: Age related macular degeneration
Age related macular degeneration
0.740 GeneticVariation BEFREE We found no associations of <i>TLR3</i> (rs3775291), <i>CFD</i> (rs3826945), <i>FRK</i> (rs1999930) or <i>LIPC</i> (rs10468017) or <i>APOE</i> ε4 alleles with nvAMD or early AMD, nor between early AMD and rs1883025 or rs4711751. 29259020

2018

dbSNP: rs1883025
rs1883025
CUI: C0242383
Disease: Age related macular degeneration
Age related macular degeneration
0.740 GeneticVariation BEFREE The present meta-analysis indicated that the T allelic in rs1883025 variant was significantly associated with the risk of developing AMD, particularly at the early stage. 26608582

2016

dbSNP: rs1883025
rs1883025
CUI: C0242383
Disease: Age related macular degeneration
Age related macular degeneration
0.740 GeneticVariation BEFREE Rs10468017 in LIPC, rs12678919 near LPL and rs1883025 in ABCA1 were not found to be associated with advanced AMD (all p > 0.05). 24498989

2015

dbSNP: rs1883025
rs1883025
CUI: C0242383
Disease: Age related macular degeneration
Age related macular degeneration
0.740 GeneticVariation BEFREE After multivariate adjustment for age, sex, educational level, smoking, BMI, lipid-lowering medication use, cardiovascular disease and diabetes, and for all relevant genetic polymorphisms (ApoE2, ApoE4, CFH Y402H, ARMS2 A69S, LIPC rs10468017, LIPC rs493258, LPL rs12678919, ABCA1 rs1883025 and CETP rs3764261), higher HDL was significantly associated with an increased risk of early (OR = 2.45, 95%CI: 1.54-3.90; P = 0.0002) and any AMD (OR = 2.29, 95%CI: 1.46-3.59; P = 0.0003). 24608419

2014

dbSNP: rs137854496
rs137854496
CUI: C0039292
Disease: Tangier Disease
Tangier Disease
0.720 GeneticVariation BEFREE Depletion of sphingomyelin in stably transfected HEK293 cells expressing the Tangier disease W590S mutant ABCA1 isoform rescued the defect in PS exposure and restored cholesterol efflux to apoAI. 24220029

2013

dbSNP: rs137854496
rs137854496
CUI: C0039292
Disease: Tangier Disease
Tangier Disease
0.720 GeneticVariation BEFREE The Tangier disease mutation W590S, which resides in the extracellular domain and impairs apoA-I-dependent lipid efflux, greatly decreased NaTC-dependent cholesterol and phospholipid efflux. 19202195

2009

dbSNP: rs137854498
rs137854498
CUI: C0039292
Disease: Tangier Disease
Tangier Disease
0.710 GeneticVariation BEFREE We have documented here a clinical variant of TD in a Japanese patient who manifested corneal lipidosis and premature coronary artery disease as well as an almost complete absence of HDL-cholesterol, by identifying a novel homozygous ABCA1 mutation (R1680W). 12111371

2002

dbSNP: rs141021096
rs141021096
CUI: C0039292
Disease: Tangier Disease
Tangier Disease
0.710 GeneticVariation BEFREE Finally, apoA-I stimulates apoE secretion normally from macrophages of two unrelated subjects with genetically confirmed Tangier Disease (mutations C733R and c.5220-5222delTCT; and mutations A1046D and c.4629-4630insA), despite severely inhibited cholesterol efflux. 15066991

2004

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE This study suggests that three SNPs rs2230806, rs4149313, and rs9282541 in ABCA1 gene are significantly associated with susceptibility to CHD; further mechanism should be performed to be applied to drug research and development. 31006134

2019

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE ABCA1 variants rs2230806 (R219K), rs4149313 (M8831I), and rs9282541 (R230C) are associated with susceptibility to coronary heart disease. 31006134

2019

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE CONCLUSIONS This meta-analysis provides convincing evidence that polymorphism of ABCA1 R219K</span> is associated with susceptibility to CHD while the CRP +1059G/C polymorphism appears to have no correlation with susceptibility to CHD. 27560308

2016

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE Evaluation of Adenosine Triphosphate-Binding Cassette Transporter A1 (ABCA1) R219K and C-Reactive Protein Gene (CRP) +1059G/C Gene Polymorphisms in Susceptibility to Coronary Heart Disease. 27560308

2016

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE CETP rs5882 (OR = 1.45, P < 0.005) and ABCA1 rs2230806 (OR = 1.42, P = 0.017) polymorphisms were associated with increased risk of CAD. 26936456

2016

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE ABCA1 R219K polymorphism is associated with CHD susceptibility, and individuals with ABCA1 have a significantly higher risk of cancer particularly in Asians. 25104170

2015

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE Among polymorphisms in ATP-binding cassette transporter A1 (ABCA1) gene, the available evidence demonstrates that the ABCA1 R219K polymorphism (G1051A, rs2230806) K allele is associated with a higher high-density lipoprotein cholesterol (HDL- C) level and may play a protective role against coronary artery disease (CAD) risk in Asians and Caucasians. 25877294

2015

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE The R219K polymorphism on ATP-binding cassette transporter A1 gene is associated with coronary heart disease risk in Asia population: evidence from a meta-analysis. 25104170

2015

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE In conclusion, our results indicate that the ABCA1 R219K polymorphism is a protective factor of CHD in Asians, but not in Caucasians. 21643759

2012

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE Quantitative assessment of the effect of ABCA1 R219K polymorphism on the risk of coronary heart disease. 21643759

2012

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE A significant association between ABCA1 R219K gene polymorphism and CAD was found in the Chinese population under the following genetic models: an allelic genetic model (OR 0.70, 95 % CI 0.62-0.78, P < 0.00001), a recessive genetic model (OR 0.51, 95 % CI 0.41-0.64, P < 0.00001), an additive genetic model (OR 0.816, 95 % CI 0780-0.855, P = 0), a dominant genetic model (OR 1.326, 95 % CI 1.232-1.427, P = 0), a homozygote genetic model (OR 0.640, 95 % CI 0.575-0.712, P = 0), and a heterozygote genetic model (OR 0.640, 95 % CI 0.575-0.712, P = 0). 23053993

2012

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE ATP-binding cassette transporter A1 R219K polymorphism and coronary artery disease in Chinese population: a meta-analysis of 5,388 participants. 23053993

2012

dbSNP: rs2230806
rs2230806
CUI: C1956346
Disease: Coronary Artery Disease
Coronary Artery Disease
0.100 GeneticVariation BEFREE The synthesis of available evidence demonstrates that the ABCA1 R219K polymorphism is associated with a higher HDL-C level in Asians and a protective role for CAD risk both in Asians and Caucasians. 21310416

2011

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE In conclusion, this meta-analysis suggests that K allele of ABCA1 R219K polymorphism is a protective factor associated with decreased CHD susceptibility, but these associations vary in different ethnic populations. 21300560

2011

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE Associations of the ATP-binding cassette transporter A1 R219K polymorphism with HDL-C level and coronary artery disease risk: a meta-analysis. 21310416

2011

dbSNP: rs2230806
rs2230806
CUI: C0010068
Disease: Coronary heart disease
Coronary heart disease
0.100 GeneticVariation BEFREE The aim of this study was to evaluate for the first time the possible association between R219K gene polymorphism and coronary artery disease in an Iranian adult population. 20303467

2010