Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121964866
rs121964866
CUI: C0020074
Disease: HSAN Type IV
HSAN Type IV
0.810 GeneticVariation BEFREE The Gly571Arg mutation, associated with the autonomic and sensory disorder congenital insensitivity to pain with anhidrosis, causes the inactivation of the NTRK1/nerve growth factor receptor. 10567924

2000

dbSNP: rs747711259
rs747711259
CUI: C0020074
Disease: HSAN Type IV
HSAN Type IV
0.810 GeneticVariation BEFREE These mutations are located in different domains of the protein; L213P in the extracellular domain, Δ736 in the kinase domain, and C300stop in the extracellular domain, a new mutation causing CIPA diagnosed in a Spanish teenager. 27551041

2016

dbSNP: rs759637817
rs759637817
CUI: C0020074
Disease: HSAN Type IV
HSAN Type IV
0.710 GeneticVariation BEFREE Here we report four homozygous mutations, two frameshift (p.Gln626fsX6 and p.Gly181fsX58), one missense (p.Arg761Trp) and one splice site (c.359+5G>T) mutation in four HSAN IV patients. 16373086

2006

dbSNP: rs748653984
rs748653984
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE The recent discovery of a point mutation leading to a change from arginine to tryptophan at residue 100 in the mature NGFβ sequence (NGF<sup>R100W</sup>) in patients with hereditary sensory and autonomic neuropathy type V (HSAN V) made it possible to distinguish the signaling mechanisms that lead to two functionally different outcomes of NGF: trophic versus nociceptive. 29483280

2018

dbSNP: rs748653984
rs748653984
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE Recently a homozygous missense mutation (R100W) in the NGF gene has been identified in HSAN V patients. 24494679

2014

dbSNP: rs748653984
rs748653984
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE Recently, a missense point mutation was found in the NGFB gene (C661T, leading to the aminoacid substitution R100W) of individuals affected by a form of hereditary loss of pain perception (hereditary sensory and autonomic neuropathy type V, HSAN V). 19945432

2010

dbSNP: rs778056858
rs778056858
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE The recent discovery of a point mutation leading to a change from arginine to tryptophan at residue 100 in the mature NGFβ sequence (NGF<sup>R100W</sup>) in patients with hereditary sensory and autonomic neuropathy type V (HSAN V) made it possible to distinguish the signaling mechanisms that lead to two functionally different outcomes of NGF: trophic versus nociceptive. 29483280

2018

dbSNP: rs778056858
rs778056858
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE Recently a homozygous missense mutation (R100W) in the NGF gene has been identified in HSAN V patients. 24494679

2014

dbSNP: rs778056858
rs778056858
Hereditary Sensory Autonomic Neuropathy, Type 5
0.030 GeneticVariation BEFREE Recently, a missense point mutation was found in the NGFB gene (C661T, leading to the aminoacid substitution R100W) of individuals affected by a form of hereditary loss of pain perception (hereditary sensory and autonomic neuropathy type V, HSAN V). 19945432

2010

dbSNP: rs1032968973
rs1032968973
CUI: C0002736
Disease: Amyotrophic Lateral Sclerosis
Amyotrophic Lateral Sclerosis
0.020 GeneticVariation BEFREE In this study, for the first time, we adopted a method involving the intranasal administration of nerve growth factor combined with lateral ventricle NSC transplantation using G93A-SOD1 transgenic mice as experimental subjects to explore the treatment effect of this combined therapy in ALS. 28694091

2017

dbSNP: rs1032968973
rs1032968973
CUI: C0002736
Disease: Amyotrophic Lateral Sclerosis
Amyotrophic Lateral Sclerosis
0.020 GeneticVariation BEFREE In the SOD1(G93A) mutant rat model of amyotrophic lateral sclerosis (ALS), neuronal death and rapid paralysis progression are associated with the emergence of activated aberrant glial cells that proliferate in the degenerating spinal cord. 27400786

2016

dbSNP: rs748653984
rs748653984
CUI: C0030193
Disease: Pain
Pain
0.020 GeneticVariation BEFREE The relationship between NGF and pain is supported by genetic evidence: mutations in the NGF TrkA receptor in patients affected by an hereditary rare disease (Hereditary Sensory and Autonomic Neuropathy type IV, HSAN IV) determine a congenital form of severe pain insensitivity, with mental retardation, while a mutation in NGFB gene, leading to the aminoacid substitution R100W in mature NGF, determines a similar loss of pain perception, without overt cognitive neurological defects (HSAN V). 21387003

2011

dbSNP: rs748653984
rs748653984
CUI: C0030193
Disease: Pain
Pain
0.020 GeneticVariation BEFREE Recently, a missense point mutation was found in the NGFB gene (C661T, leading to the aminoacid substitution R100W) of individuals affected by a form of hereditary loss of pain perception (hereditary sensory and autonomic neuropathy type V, HSAN V). 19945432

2010

dbSNP: rs775984846
rs775984846
THYROID CARCINOMA, SPORADIC MEDULLARY
0.020 GeneticVariation BEFREE Our data demonstrate that the RET G691S variant could modulate the age of onset of sMTC as demonstrated previously for familial tumours. 18331611

2008

dbSNP: rs775984846
rs775984846
THYROID CARCINOMA, SPORADIC MEDULLARY
0.020 GeneticVariation BEFREE On the other hand, the frequency and distribution of G691S/S904S variants were similar in both groups of study, leading to exclude their role in sMTC in our series. 16646689

2006

dbSNP: rs778056858
rs778056858
CUI: C0030193
Disease: Pain
Pain
0.020 GeneticVariation BEFREE The relationship between NGF and pain is supported by genetic evidence: mutations in the NGF TrkA receptor in patients affected by an hereditary rare disease (Hereditary Sensory and Autonomic Neuropathy type IV, HSAN IV) determine a congenital form of severe pain insensitivity, with mental retardation, while a mutation in NGFB gene, leading to the aminoacid substitution R100W in mature NGF, determines a similar loss of pain perception, without overt cognitive neurological defects (HSAN V). 21387003

2011

dbSNP: rs778056858
rs778056858
CUI: C0030193
Disease: Pain
Pain
0.020 GeneticVariation BEFREE Recently, a missense point mutation was found in the NGFB gene (C661T, leading to the aminoacid substitution R100W) of individuals affected by a form of hereditary loss of pain perception (hereditary sensory and autonomic neuropathy type V, HSAN V). 19945432

2010

dbSNP: rs1007211
rs1007211
CUI: C0008370
Disease: Cholestasis
Cholestasis
0.010 GeneticVariation BEFREE Estradiol-17β-D-glucuronide (E17G), through the activation of different signaling proteins, induces acute endocytic internalization of canalicular transporters in rat, including multidrug resistance-associated protein 2 (Abcc2) and bile salt export pump (Abcb11), generating cholestasis. 29090346

2018

dbSNP: rs1009726086
rs1009726086
CUI: C0221292
Disease: Basophilic leukemia
Basophilic leukemia
0.010 GeneticVariation BEFREE Overexpression of wild-type and R745C EPHB2 variant in RBL-2H3 (rat basophilic leukemia) cells stably expressing human GPVI confirmed that EPHB2 R745C mutation impaired EPHB2 autophosphorylation but had no effect on ephrin ligand-induced EPHB2 clustering, suggesting it did not interfere with EPHB2-ephrin-mediated cell-to-cell contact. 30213874

2018

dbSNP: rs1293540396
rs1293540396
THYROID CARCINOMA, SPORADIC MEDULLARY
0.010 GeneticVariation BEFREE Recently, we described two possible low penetrance susceptibility alleles in the gene encoding RET coreceptor GFRalpha1, -193C > G and 537T > C, in a German series of sMTC. 12490080

2002

dbSNP: rs150579345
rs150579345
CUI: C0398368
Disease: Lymphatic Abnormalities
Lymphatic Abnormalities
0.010 GeneticVariation BEFREE The hotspot mutations c.1624G>A, c.1633G>A, and c.3140A>G (p.Glu542Lys, p.Glu545Lys, and p.His1047Arg), frequent in PIK3CA-associated cancers, overgrowth syndromes, and lymphatic malformation (LM), account for >92% of individuals who carry mutations. 26637981

2015

dbSNP: rs199647144
rs199647144
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma
0.010 GeneticVariation BEFREE Transcriptional profiling of Kras(G12V)-driven mouse hyperplasias revealed intertumor diversity with a subset that exhibited an aggressive transcriptional profile analogous to that of advanced human adenocarcinomas. 26855149

2016

dbSNP: rs371344688
rs371344688
CUI: C0025202
Disease: melanoma
melanoma
0.010 GeneticVariation BEFREE Our results indicate that a causative role for M379I and R577G NTRK1 mutations in melanoma development is highly unlikely. 24965840

2014

dbSNP: rs374918502
rs374918502
CUI: C4551683
Disease: Adrenal Gland Pheochromocytoma
Adrenal Gland Pheochromocytoma
0.010 GeneticVariation BEFREE There was a greater frequency of pheochromocytoma in those subjects who had the Cys634Arg mutation (p < 0.03). 18795243

2008

dbSNP: rs374918502
rs374918502
CUI: C0031511
Disease: Pheochromocytoma
Pheochromocytoma
0.010 GeneticVariation BEFREE There was a greater frequency of pheochromocytoma in those subjects who had the Cys634Arg mutation (p < 0.03). 18795243

2008