DisGeNET - a database of gene-disease associations

Source: GWASDB

Disease: Serum HDL cholesterol measurement ×

Gene: ABCA1 ×

Results per page

Gene

Disease

Variant

Source

Association Type

Semantic type

Protein Class

Disease Class

Type

Original DB

Consequence

DSI _v

DPI _v

pLI

EI _vda

EL _gda

Score _vda

PMID

PMID Year

AF_EXOME

Num. PMIDs

Num. SNPs_gda

AF_GENOME

Variant

Gene

Disease

Risk Allele

Score _vda

Association Type

Original DB

Sentence supporting the association

PMID

PMID Year

dbSNP:

rs10120087

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs11789603

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs12341993

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs12686004

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs12686004

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits.

21909109

2011

dbSNP:

rs13284054

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs13290420

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs1883025

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Discovery and refinement of loci associated with lipid levels.

24097068

2013

dbSNP:

rs1883025

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs1883025

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Multi-ethnic analysis of lipid-associated loci: the NHLBI CARe project.

22629316

2012

dbSNP:

rs1883025

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Biological, clinical and population relevance of 95 loci for blood lipids.

20686565

2010

dbSNP:

rs1883025

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Common variants at 30 loci contribute to polygenic dyslipidemia.

19060906

2009

dbSNP:

rs2000069

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2066714

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2066718

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2254819

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2275544

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2275545

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2515629

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Multi-ethnic analysis of lipid-associated loci: the NHLBI CARe project.

22629316

2012

dbSNP:

rs2575876

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs2777795

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs3780543

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs3847300

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs3847305

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012

dbSNP:

rs3858076

ABCA1

CUI:	C0428472
Disease:	Serum HDL cholesterol measurement

Serum HDL cholesterol measurement

0.700

GeneticVariation

GWASDB

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

23063622

2012