Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10057
Gene Symbol: ABCC5
ABCC5
0.010 Biomarker disease BEFREE Furthermore, the specific association between oesophageal adenocarcinoma and the locus near HTR3C and ABCC5 might constitute a novel genetic marker for prediction of the transition from Barrett's oesophagus to oesophageal adenocarcinoma. 27527254 2016
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 AlteredExpression disease BEFREE CDX2 and PITX1 messenger RNA (mRNA) expression levels, relative to the control gene beta-actin, were measured by reverse transcription-polymerase chain reaction in specimens of Barrett's IM (n = 21), dysplasia (n = 18), adenocarcinoma (n = 20), and matching normal squamous esophagus tissues (n = 39) collected from 19 patients with Barrett's esophagus and 20 patients with esophageal adenocarcinoma. 16291394 2005
Entrez Id: 8754
Gene Symbol: ADAM9
ADAM9
0.010 Biomarker disease BEFREE Patient samples also showed increased mRNA expression of ADAM12 in esophagitis, of ADAM9 in BE, and of ADAMs 9, 12 and 19 in Barrett's dysplasia, as compared to controls. 27026568 2017
Entrez Id: 9370
Gene Symbol: ADIPOQ
ADIPOQ
0.010 AlteredExpression disease BEFREE Adiponectin and leptin receptors expression in Barrett's esophagus and normal squamous epithelium in relation to central obesity status. 23756394 2013
Entrez Id: 51094
Gene Symbol: ADIPOR1
ADIPOR1
0.010 AlteredExpression disease BEFREE Using linear correlation analysis we found the positive correlation between AdipoR1 expression in Barrett's epithelium compared to squamous epithelium in the same patients (N) (r=0.5; p=0.008) and between ObR expression in BE and N (r=0.8; p<0.001). 23756394 2013
Entrez Id: 79602
Gene Symbol: ADIPOR2
ADIPOR2
0.010 Biomarker disease BEFREE Expression of adiponectin receptors 1 and 2 protein (AdipoR1, AdipoR2) as well as leptin receptor protein (ObR) in biopsies from 27 BE and normal squamous epithelium (N) in the same patients as well as in obese and normal controls were assessed with Western-blot analysis. 23756394 2013
Entrez Id: 154
Gene Symbol: ADRB2
ADRB2
0.020 Biomarker disease BEFREE We compared markers of EMT and cell motility in trans-well and 3-dimensional organotypic culture systems among dysplastic BE epithelial cell lines, nondysplastic telomerase-immortalized BE cell lines (BAR-T), and BAR-T cells exposed acutely or for 20 weeks to acidic bile salts. 30268789 2019
Entrez Id: 154
Gene Symbol: ADRB2
ADRB2
0.020 Biomarker disease BEFREE We looked for evidence of acid-induced DNA damage, including DSBs, in benign Barrett's epithelial (BAR-T) cell lines in vitro and in patients with Barrett's esophagus in vivo. 19920191 2009
Entrez Id: 84740
Gene Symbol: AFAP1-AS1
AFAP1-AS1
0.010 Biomarker disease BEFREE Methylation of the long noncoding RNA AFAP1-AS1 is reduced in BE and EAC, and its expression inhibits cancer-related biologic functions of EAC cells. 23333711 2013
Entrez Id: 192669
Gene Symbol: AGO3
AGO3
0.100 GeneticVariation disease GWASCAT Interactions Between Genetic Variants and Environmental Factors Affect Risk of Esophageal Adenocarcinoma and Barrett's Esophagus. 29551738 2018
Entrez Id: 10551
Gene Symbol: AGR2
AGR2
0.020 Biomarker disease BEFREE AGR2 preferentially engages with MUC-5 as a primary client and is coexpressed with the acidic mucin in Barrett's esophagus and esophageal adenocarcinoma tissue. 31436131 2019
Entrez Id: 10551
Gene Symbol: AGR2
AGR2
0.020 Biomarker disease BEFREE The results support the deduction that BE is a tissue with enhanced glycoprotein synthesis machinery (DPP4, ATP2A3, AGR2) designed to provide strong mucosal defenses aimed at resisting gastro-esophageal reflux. 21829465 2011
Entrez Id: 183
Gene Symbol: AGT
AGT
0.010 GeneticVariation disease BEFREE It was found that seven of 28 (25%) super-minute dysplasia lesions in the Barrett's esophagus showed K-ras mutation, and were a single mutation, with AGT being detected in three lesions and GAT being detected in four lesions. 14641312 2003
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.020 Biomarker disease BEFREE AID activation is widely observed in gastrointestinal tissues with cancer-associated inflammation, such as chronic viral hepatitis, Helicobacter pylori-related gastritis, Barrett's esophagus and inflammatory bowel disease. 22469133 2012
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.020 Biomarker disease BEFREE Immunoreactivity for endogenous AID was observed in 24 of 28 (85.7%) specimens of the columnar cell-lined Barrett's oesophagus and in 20 of 22 (90.9%) of Barrett's adenocarcinoma, whereas weak or no AID protein expression was detectable in normal squamous epithelial cells of the oesophagus. 21890457 2011
Entrez Id: 9590
Gene Symbol: AKAP12
AKAP12
0.010 PosttranslationalModification disease BEFREE There was a significant correlation between AKAP12 hypermethylation and BE segment length, a known clinical neoplastic progression risk factor. 18199717 2008
Entrez Id: 57016
Gene Symbol: AKR1B10
AKR1B10
0.010 Biomarker disease LHGDN Proteomic screening of a cell line model of esophageal carcinogenesis identifies cathepsin D and aldo-keto reductase 1C2 and 1B10 dysregulation in Barrett's esophagus and esophageal adenocarcinoma. 18396902 2008
Entrez Id: 1646
Gene Symbol: AKR1C2
AKR1C2
0.010 Biomarker disease LHGDN Proteomic screening of a cell line model of esophageal carcinogenesis identifies cathepsin D and aldo-keto reductase 1C2 and 1B10 dysregulation in Barrett's esophagus and esophageal adenocarcinoma. 18396902 2008
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.120 GeneticVariation disease GWASDB A genome-wide association study identifies new susceptibility loci for esophageal adenocarcinoma and Barrett's esophagus. 24121790 2013
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.120 GeneticVariation disease GWASCAT Genome-wide association studies in oesophageal adenocarcinoma and Barrett's oesophagus: a large-scale meta-analysis. 27527254 2016
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.120 GeneticVariation disease BEFREE Our data do not provide evidence that the ALDH1A2 locus confers equal risk in early and late stages of BE/EAC sequence. 26783083 2016
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.120 GeneticVariation disease GWASCAT A genome-wide association study identifies new susceptibility loci for esophageal adenocarcinoma and Barrett's esophagus. 24121790 2013
Entrez Id: 8854
Gene Symbol: ALDH1A2
ALDH1A2
0.120 AlteredExpression disease BEFREE The higher expression of RALDH2 and FOXP3 in BE points at a mechanism associated with a possible anti-inflammatory microenvironment. 29967615 2018
Entrez Id: 23600
Gene Symbol: AMACR
AMACR
0.010 AlteredExpression disease LHGDN p16, cyclin D1, Ki-67, and AMACR as markers for dysplasia in Barrett esophagus. 18665038 2008
Entrez Id: 23600
Gene Symbol: AMACR
AMACR
0.010 Biomarker disease BEFREE The frequency of AMACR-positivity was 12% in BE, 47.1% in IND, 44.4% in LGD, 93.3% in HGD, and 96.2% in AdenoCa. 18665038 2008