Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 465
Gene Symbol: ATD
ATD
0.010 Biomarker disease BEFREE Abbreviations: AGA: anti-gliadin antibodies; Anti-DGP-ab: anti-deamidated gliadin peptide antibodies; Anti-tTG-ab: anti-tissue transglutaminase antibodies; ATD: auto-immune thyroid disorders; BMD: bone mineral density; CD: coeliac disease; DH: dermatitis herpetiformis; EMA: anti-endomysial antibodies; FDR: first-degree relatives; GFD: gluten-free diet; HbA1c: haemoglobin A1c; HLA: human leucocyte antigen; IBS: irritable bowel syndrome; LMIC: low- and middle-income countries; NPV: negative predictive value; NRCD: non-responsive coeliac disease; POCT: point-of-care tests; SDR: second-degree relatives; SIBO: small intestinal bacterial overgrowth; T1DM: type 1 diabetes mellitus; ULN: upper limit of normal. 30099930 2019
Entrez Id: 2550
Gene Symbol: GABBR1
GABBR1
0.010 Biomarker disease BEFREE At present multiple therapeutic compounds/drugs are available targeting GABBR1 and ADRA1A, which could be tested for their effectiveness against CD in controlled drug trials. 31554915 2019
Entrez Id: 406947
Gene Symbol: MIR155
MIR155
0.010 AlteredExpression disease BEFREE MiRNA-146a and miRNA-155 expression showed high sensitivity and specificity for the presence of CD, irrespective of the current dietary treatment. 31781909 2019
Entrez Id: 10917
Gene Symbol: BTNL3
BTNL3
0.010 Biomarker disease BEFREE In the setting of celiac disease (CeD), where exposure to dietary antigen can be controlled, gluten-induced inflammation triggered a profound depletion of naturally occurring Vγ4<sup>+</sup>/Vδ1<sup>+</sup> intraepithelial lymphocytes (IELs) with innate cytolytic properties and specificity for the butyrophilin-like (BTNL) molecules BTNL3/BTNL8. 30739797 2019
Entrez Id: 23705
Gene Symbol: CADM1
CADM1
0.010 Biomarker disease BEFREE We identified the upregulation of novel genes including IL12R, ITGAM and IGSF4 involved in the immune response machinery and cell adhesion process in the mucosa of subjects with active CD compared to those in remission. 30998704 2019
Entrez Id: 57104
Gene Symbol: PNPLA2
PNPLA2
0.010 Biomarker disease BEFREE Pigment Epithelium-Derived Factor Affects Angiogenesis in Celiac Disease. 30726852 2019
Entrez Id: 4810
Gene Symbol: NHS
NHS
0.010 GeneticVariation disease BEFREE The present study aimed to compare clinical presentation and adherence to a gluten-free diet between South Asian and Caucasian patients with coeliac disease in East Lancashire METHODS: In total, 33 South Asian and 113 Caucasian adult patients diagnosed with coeliac disease under the care of the Dietetics Department at East Lancashire Hospitals NHS Trust were selected using a convenience sampling method and then allocated to the South Asian or Caucasian group. 30891843 2019
Entrez Id: 7332
Gene Symbol: UBE2L3
UBE2L3
0.010 AlteredExpression disease BEFREE The relative expression of UBE2L3 isoforms predicts CeD with 100% specificity and sensitivity and could be used as a diagnostic marker, especially in the absence of gluten consumption. 31127932 2019
Entrez Id: 8988
Gene Symbol: HSPB3
HSPB3
0.010 GeneticVariation disease BEFREE We examined <i>PTPN22</i> rs2476601 (p.Arg620Trp), <i>NLRP3</i> rs35829419 (p.Gln705Lys), and <i>CARD8</i> rs2043211 (p.Cys10Ter) in 66 subjects with coexisting T1D and CD, 65 subjects with T1D who did not develop CD, 67 subjects diagnosed only with CD and 127 healthy unrelated Slovenian individuals. 30915320 2019
Entrez Id: 3002
Gene Symbol: GZMB
GZMB
0.010 AlteredExpression disease BEFREE Treatment of CD IEL and LPMC with Ficz reduced the levels of inflammatory cytokines, granzyme B and perforin. 30778350 2019
Entrez Id: 92170
Gene Symbol: MTG1
MTG1
0.010 Biomarker disease BEFREE Multi-functional transglutaminase 2 (TG2), which possesses protein cross-linking and GTP hydrolysis activities, is involved in various cellular processes, including apoptosis, angiogenesis, wound healing, and neuronal regeneration, and is associated with many human diseases, including inflammatory disease, celiac disease, neurodegenerative disease, diabetes, tissue fibrosis, and cancers. 30321187 2018
Entrez Id: 4092
Gene Symbol: SMAD7
SMAD7
0.010 Biomarker disease BEFREE The high SMAD7 immunoreactivity and lack of p-SMAD3 expression in the LP suggests defective TGF-β signaling in the LP in EE similar to a previously reported SMAD7-mediated inflammatory pathway in refractory CD and Crohn's disease. 29415065 2018
Entrez Id: 80305
Gene Symbol: TRABD
TRABD
0.010 Biomarker disease BEFREE Prevalence of CD was 1.14% (95% CI, 0.3-3.4), almost double what was previously observed.Four patients were diagnosed with CD. tTG2 was positive in three (0.85%) and POCT in 29 (8.2%). 30023063 2018
Entrez Id: 7051
Gene Symbol: TGM1
TGM1
0.010 Biomarker disease BEFREE Microbial Transglutaminase Is Immunogenic and Potentially Pathogenic in Pediatric Celiac Disease. 30619787 2018
Entrez Id: 54953
Gene Symbol: ODR4
ODR4
0.010 Biomarker disease BEFREE I-FABP levels in the 71 patients with tTG 1-10x ULN and biopsy-proven CD (median 725 pg/mL) were not significantly different (p = 0.13) from the levels in the 24 patients with a tTG 1-10x ULN but a normal biopsy (median 497 pg/mL). 29383769 2018
Entrez Id: 4045
Gene Symbol: LSAMP
LSAMP
0.010 Biomarker disease BEFREE Combined with point-of-care antibody testing, CD-LAMP may enable immediate, confident CD diagnosis at a low cost in the clinical setting. 29458095 2018
Entrez Id: 3578
Gene Symbol: IL9
IL9
0.010 AlteredExpression disease BEFREE However, Candida-driven IL-9 and mucosal MCs also contribute to barrier function loss, dissemination, and inflammation in experimental leaky gut models and are upregulated in patients with celiac disease. 29742432 2018
Entrez Id: 28388
Gene Symbol: IGHV5-51
IGHV5-51
0.010 AlteredExpression disease BEFREE Differential expression of proteins in particular from mature enterocytes, neutrophils, and plasma cells could distinguish untreated from treated CD mucosa, and Ig variable region IGHV5-51 expression was found to serve as a CD-specific marker of ongoing immune activation. 29684362 2018
Entrez Id: 4311
Gene Symbol: MME
MME
0.010 Biomarker disease BEFREE Among children with TPOAb positivity, hypothyroidism was significantly more common (odds ratio 3.1; 95% CI 1.03-9.6) in children with CD (10/19) than in children without CD (12/46). 29373441 2018
Entrez Id: 80339
Gene Symbol: PNPLA3
PNPLA3
0.010 GeneticVariation disease BEFREE PNPLA3 rs738409 Polymorphism Predicts Development and Severity of Hepatic Steatosis but Not Metabolic Syndrome in Celiac Disease. 30189691 2018
Entrez Id: 3956
Gene Symbol: LGALS1
LGALS1
0.010 AlteredExpression disease BEFREE Galectins in Intestinal Inflammation: Galectin-1 Expression Delineates Response to Treatment in Celiac Disease Patients. 29545799 2018
Entrez Id: 1769
Gene Symbol: DNAH8
DNAH8
0.010 Biomarker disease BEFREE The prevalence of TGA (and/or history of CD), TPOA and ATPA in patients was 9·0, 9·6 and 8·2%, respectively; 3·1% had two or more autoantibodies. 29431870 2018
Entrez Id: 268
Gene Symbol: AMH
AMH
0.010 AlteredExpression disease BEFREE However, AMH level was significantly lower in the CD group (p=0.032). 29476685 2018
Entrez Id: 2736
Gene Symbol: GLI2
GLI2
0.010 Biomarker disease BEFREE Wheat Gli-2 loci encode complex groups of α-gliadin prolamins that are important for breadmaking, but also major triggers of celiac disease (CD). 29581476 2018
Entrez Id: 4087
Gene Symbol: SMAD2
SMAD2
0.010 AlteredExpression disease BEFREE We aimed to characterize EE inflammatory pathways by determining SMAD7 and p-SMAD2,3 levels (using Western blotting) in EE duodenal biopsies (N = 19 children, 7 from Pakistan, 12 from Zambia) and comparing these with healthy controls (Ctl) and celiac disease (CD) patients from Italy. 29415065 2018