Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1131
Gene Symbol: CHRM3
CHRM3
0.010 GeneticVariation disease BEFREE CHRM3 single-nucleotide polymorphism rs4620530 might confer an increased genetic risk for the development of PBC. 31747477 2020
Entrez Id: 8792
Gene Symbol: TNFRSF11A
TNFRSF11A
0.010 AlteredExpression disease BEFREE The overall hepatic RANK expression was associated with disease severity and biochemical response in PBC patients. 31377883 2020
Entrez Id: 3672
Gene Symbol: ITGA1
ITGA1
0.010 AlteredExpression disease BEFREE Circulating NK cells from individuals with PBC were constitutively activated, with higher levels of CD49a and the liver-homing marker, CXCR6, compared to participants with non-autoimmune chronic liver disease and healthy controls. 31803181 2019
Entrez Id: 27152
Gene Symbol: INTU
INTU
0.010 Biomarker disease BEFREE Obeticholic acid (INT-747) has achieved the biggest clinical success so far being in use for the treatment of primary biliary cholangitis. 31254667 2019
Entrez Id: 6344
Gene Symbol: SCTR
SCTR
0.010 GeneticVariation disease BEFREE Male and female dominant-negative TGF-β receptor II (dnTGF-βRII) (model of PBC) and wild-type mice at 12 wk of age were treated with saline or the SR antagonist, Sec 5-27, for 1 wk. dnTGF-βRII mice expressed features of early-stage PBC along with enhanced Sct/SR axis activation and Sct secretion. dnTGF-βRII mice had increased biliary proliferation or senescence, inflammation, and liver fibrosis. 31251081 2019
Entrez Id: 10344
Gene Symbol: CCL26
CCL26
0.010 AlteredExpression disease BEFREE Serum CCL11, CCL24 and CCL26 levels were significantly higher in PBC patients than those with CHB and HC (P < 0.05). 30583236 2019
Entrez Id: 3958
Gene Symbol: LGALS3
LGALS3
0.010 Biomarker disease BEFREE Multiple-hit etiology of primary biliary cholangitis (PBC) and evolving immune response at various stages of the disease includes involvement of Gal-3 in PBC pathogenesis. 31231399 2019
Entrez Id: 9757
Gene Symbol: KMT2B
KMT2B
0.010 AlteredExpression disease BEFREE In primary biliary cholangitis/cirrhosis (PBC) patients, hepatic levels of miR-210 and KLF4 were highly elevated, whereas nuclear levels of SHP and MLL4 were reduced. 31549733 2019
Entrez Id: 9353
Gene Symbol: SLIT2
SLIT2
0.010 AlteredExpression disease BEFREE Our findings revealed that the serum levels and hepatic expression of Slit2 were significantly increased in patients with primary biliary cirrhosis (PBC). 31545977 2019
Entrez Id: 8085
Gene Symbol: KMT2D
KMT2D
0.010 AlteredExpression disease BEFREE In primary biliary cholangitis/cirrhosis (PBC) patients, hepatic levels of miR-210 and KLF4 were highly elevated, whereas nuclear levels of SHP and MLL4 were reduced. 31549733 2019
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 AlteredExpression disease BEFREE PD-L1 expression on TCs associates with high-risk clinicopathological parameters and poor prognosis in PBC patients, while PD-L1+ TILs may relate to a better survival. 31359214 2019
Entrez Id: 8431
Gene Symbol: NR0B2
NR0B2
0.010 AlteredExpression disease BEFREE In primary biliary cholangitis/cirrhosis (PBC) patients, hepatic levels of miR-210 and KLF4 were highly elevated, whereas nuclear levels of SHP and MLL4 were reduced. 31549733 2019
Entrez Id: 6356
Gene Symbol: CCL11
CCL11
0.010 Biomarker disease BEFREE Association of CCL11, CCL24 and CCL26 with primary biliary cholangitis. 30583236 2019
Entrez Id: 374
Gene Symbol: AREG
AREG
0.010 AlteredExpression disease BEFREE First, we demonstrated increased AREG levels in livers from patients with primary biliary cholangitis (PBC) and primary sclerosing cholangitis (PSC). 30411380 2019
Entrez Id: 9314
Gene Symbol: KLF4
KLF4
0.010 AlteredExpression disease BEFREE In primary biliary cholangitis/cirrhosis (PBC) patients, hepatic levels of miR-210 and KLF4 were highly elevated, whereas nuclear levels of SHP and MLL4 were reduced. 31549733 2019
Entrez Id: 56983
Gene Symbol: POGLUT1
POGLUT1
0.010 GeneticVariation disease BEFREE This is the first study to demonstrate that POGLUT1 and not CD80 is the effector gene regulated by the primary functional SNP rs2293370, and that increased expression of POGLUT1 might be involved in the pathogenesis of PBC. 30643196 2019
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.010 Biomarker disease BEFREE PBC-specific Gp120 antibodies are optimal predictors of PBC prognosis at the time of diagnosis. 31737133 2019
Entrez Id: 115908
Gene Symbol: CTHRC1
CTHRC1
0.010 AlteredExpression disease BEFREE Meanwhile, there were significant correlations between serum CTHRC1 levels and both the degrees of hepatic inflammation and fibrosis stage in the PBC group (r = 0.300, P = 0.022; r = 0.321, P = 0.012). 31102333 2019
Entrez Id: 79841
Gene Symbol: AGBL2
AGBL2
0.010 Biomarker disease BEFREE Others are relatively specific for certain disease, such as anti β2GP1 for thrombosis syndrome, anti ANCA for primary sclerosing cholangitis (PSC), AAV, ILD and RI, anti CCP2 for RA, ILD and AP. the prevalence of anti AMA was higher in primary biliary cirrhosis (PBC), followed in CS, also, ANA have been identified in up to 25% of patients with primary biliary cirrhosis. 30807792 2019
Entrez Id: 727830
Gene Symbol: SPATA31A3
SPATA31A3
0.010 Biomarker disease BEFREE This study highlighted SPATA31A3 and GARP as new biomarkers for primary biliary cholangitis and unravelled molecular stimuli underlying GARP expression in human cholangiocytes. 31033124 2019
Entrez Id: 2615
Gene Symbol: LRRC32
LRRC32
0.010 Biomarker disease BEFREE Two autoantigens, SPATA31A3 and GARP, showed high reactivity with primary biliary cholangitis sera, containing or not anti-mitochondrial antibodies. 31033124 2019
Entrez Id: 406992
Gene Symbol: MIR210
MIR210
0.010 AlteredExpression disease BEFREE In primary biliary cholangitis/cirrhosis (PBC) patients, hepatic levels of miR-210 and KLF4 were highly elevated, whereas nuclear levels of SHP and MLL4 were reduced. 31549733 2019
Entrez Id: 28585
Gene Symbol: TRBV10-1
TRBV10-1
0.010 AlteredExpression disease BEFREE Among them, TRAV29/J22, TRBV6-5/J2-6, and TRBV10-1/J2-1 were expressed in PBC but the expression was negligible in the controls, with more mature and longer forms observed in PBC-CD4<sup>+</sup> T cells. 30690835 2019
Entrez Id: 3952
Gene Symbol: LEP
LEP
0.010 Biomarker disease BEFREE We further applied LEP to perform integrative analysis of Crohn's disease from WTCCC and summary statistics from GWAS of some other diseases, such as Type 1 diabetes, Ulcerative colitis and Primary biliary cirrhosis. 30307540 2019
Entrez Id: 6369
Gene Symbol: CCL24
CCL24
0.010 Biomarker disease BEFREE Association of CCL11, CCL24 and CCL26 with primary biliary cholangitis. 30583236 2019