Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.040 AlteredExpression disease BEFREE In chondrosarcoma research, abnormalities in hereditary multiple exostoses genes, which encode protein products essential for normal cartilage development, and a potential mechanism for the characteristic chemotherapy resistance of cartilaginous tumors (overexpression of P-glycoprotein) have been described. 9702400 1998
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.040 Biomarker disease BEFREE Moreover, our data showed a strong correlation between glucose metabolism and doxorubicin resistance in chondrosarcoma cells; doxorubicin-resistant cells displayed highly activated glucose metabolism and depended more on glucose supply. 24789077 2014
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.040 AlteredExpression disease BEFREE Multidrug resistance-1 and p-glycoprotein in human chondrosarcoma cell lines: expression correlates with decreased intracellular doxorubicin and in vitro chemoresistance. 10632461 1999
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.040 Biomarker disease BEFREE Based on the results, a new siRNA-based therapeutic strategy targeting antiapoptotic genes can be designed to overcome the chemoresistance of chondrosarcomas which is often conferred by P-glycoprotein. 19445670 2009
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.050 AlteredExpression disease BEFREE TLR1/2, TLR6 and MUC5B were downregulated in human chondrosarcoma and upregulated in dose-response manner upon PRP-1 treatment. 29138803 2018
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.050 Biomarker disease BEFREE PRP-1 had strong inhibitory effect on viability of chondrosarcoma and multilineage induced multipotent adult cells (embryonic primitive cell type). 26094604 2015
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.050 Biomarker disease BEFREE The fact that addition of PRP-1 caused drastic inactivation of Myc-luc response element to the control level in human chondrosarcoma JJ012 cell line prompts to investigate further this neuropeptides powerful antioncogenic potential, opening up possibilities to consider PRP-1 as a potential therapeutic tool for chondrosarcoma treatment. 18612811 2009
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.050 Biomarker disease BEFREE A significant decrease in ALDHhigh CSCs was observed following treatment of chondrosarcoma JJ012 cells with PRP‑1. 31180539 2019
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.050 Biomarker disease BEFREE Regulation of onco and tumor suppressor MiRNAs by mTORC1 inhibitor PRP-1 in human chondrosarcoma. 24178909 2014
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.050 Biomarker disease BEFREE Then, a screening was realized by surface plasmon resonance technology to assess biomolecular interactions between QA derivatives and aggrecan, the most abundant PG in chondrosarcoma. 30199705 2018
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.050 AlteredExpression disease BEFREE Differential expression of aggrecan mRNA isoforms by chondrosarcoma cells. 12553050 2003
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.050 Biomarker disease BEFREE Studies in vitro with retinoic acid-stimulated rat chondrosarcoma cells indicated that the rAgg1mut substrate was cleaved at the 'aggrecanase' site equivalent to Glu373-Ala374 (human aggrecan sequence enumeration) in its interglobular domain sequence segment. 9639575 1998
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.050 Biomarker disease BEFREE The overall arrangement of globular and carbohydrate-attachment domains is similar to human and rat chondrosarcoma aggrecan, but there are significant differences in detailed homology between chick and mammalian core proteins. 8226878 1993
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.050 Biomarker disease BEFREE These results support the concept that versican has the capacity to form more extensive cell-associated matrix than aggrecan, and the prominent matrix formation alters the cell behavior of chondrosarcoma more aggressively. 21671478 2012
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 AlteredExpression disease BEFREE In human chondrosarcoma cells MMP-28 was activated by proprotein convertases and the active form of the enzyme preferentially associated with the extracellular matrix in a C-terminal independent manner. over-expression of MMP-28 in chondrosarcoma cells led to altered cell morphology with increased organisation of actin. 19375502 2009
Entrez Id: 92
Gene Symbol: ACVR2A
ACVR2A
0.020 AlteredExpression disease BEFREE Furthermore, a novel FN1-ACVR2A fusion transcript was observed in both chondrosarcoma and osteochondromatosis cases. 25024164 2014
Entrez Id: 92
Gene Symbol: ACVR2A
ACVR2A
0.020 GeneticVariation disease BEFREE To analyze further and validate the findings, we performed FISH and demonstrated recurrent FN1-ACVR2A rearrangements in synovial chondromatosis (57%), and chondrosarcoma secondary to synovial chondromatosis (75%), showing that FN1 and/or AVCR2A gene rearrangements do not distinguish between benign and malignant synovial chondromatosis. 31273315 2019
Entrez Id: 8751
Gene Symbol: ADAM15
ADAM15
0.010 AlteredExpression disease BEFREE The extension of the analysis to chondrosarcomas showed a strong up-regulation of MDC15 mRNA in these malignant transformed cells. 10513811 1999
Entrez Id: 101
Gene Symbol: ADAM8
ADAM8
0.010 Biomarker disease BEFREE However, the underlying mechanism of ADAM8 in modulating chondrosarcoma (CHS) metastasis remains unclear. 31305294 2019
Entrez Id: 170690
Gene Symbol: ADAMTS16
ADAMTS16
0.020 AlteredExpression disease BEFREE Stable over-expression of ADAMTS16 in chondrosarcoma cells led to a decrease in cell proliferation and migration, though not adhesion, as well as a decrease in the expression of matrix metalloproteinase-13 (MMP13). 19635554 2009
Entrez Id: 170690
Gene Symbol: ADAMTS16
ADAMTS16
0.020 AlteredExpression disease BEFREE ADAMTS16 mRNA expression level of chondrosarcoma cells was found to be insignificantly decreased in chondrosarcoma cells induced by insulin detected by the qRT-PCR instrument. 26181853 2015
Entrez Id: 9509
Gene Symbol: ADAMTS2
ADAMTS2
0.010 Biomarker disease BEFREE We investigated such a role for ADAMTS-3 in Swarm rat chondrosarcoma RCS-LTC cells, which fail to process the procollagen II N-propeptide. 11408482 2001
Entrez Id: 9508
Gene Symbol: ADAMTS3
ADAMTS3
0.010 Biomarker disease BEFREE We investigated such a role for ADAMTS-3 in Swarm rat chondrosarcoma RCS-LTC cells, which fail to process the procollagen II N-propeptide. 11408482 2001
Entrez Id: 9507
Gene Symbol: ADAMTS4
ADAMTS4
0.010 Biomarker disease BEFREE Stable knock-down of CSPG4/NG2 in the JJ012 chondrosarcoma cell line by shRNA resulted in decreased cell proliferation and migration as well as a decrease in gene expression of the MMP (matrix metalloproteinase) 3 protease and ADAMTS4 (aggrecanase). 27292772 2016
Entrez Id: 92949
Gene Symbol: ADAMTSL1
ADAMTSL1
0.010 AlteredExpression disease BEFREE Gene profiling studies identified genes differentially expressed in chondrosarcomas following IPI-926 treatment, one of which, ADAMTSL1, regulates chondrosarcoma cell proliferation. 24634412 2014