Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.010 Biomarker disease BEFREE Triggered by a case of malignant transformation in SC (synovial chondrosarcoma) showing a novel KMT2A-BCOR gene fusion by targeted RNA sequencing, we sought to evaluate the molecular abnormalities in a cohort of 27 SC cases using a combined methodology of fluorescence in situ hybridization (FISH) and/or targeted RNA sequencing. 31589790 2020
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.010 GeneticVariation disease BEFREE Triggered by a case of malignant transformation in SC (synovial chondrosarcoma) showing a novel KMT2A-BCOR gene fusion by targeted RNA sequencing, we sought to evaluate the molecular abnormalities in a cohort of 27 SC cases using a combined methodology of fluorescence in situ hybridization (FISH) and/or targeted RNA sequencing. 31589790 2020
Entrez Id: 1302
Gene Symbol: COL11A2
COL11A2
0.010 GeneticVariation disease BEFREE This study demonstrates the capacity of the PARP inhibitor Olaparib to radiosensitize mutated chondrosarcoma cells to conventional photon irradiation, proton and carbon ion irradiation. 31312595 2019
Entrez Id: 545
Gene Symbol: ATR
ATR
0.010 AlteredExpression disease BEFREE We found that chondrosarcoma cells expressed very low basal levels of phosphorylated ATR, but cisplatin treatment induced the activation of ATR-Chk1 signaling in a dose- and time-dependent manner, suggesting the induction of DDR. 31839711 2019
Entrez Id: 5916
Gene Symbol: RARG
RARG
0.010 AlteredExpression disease BEFREE All human chondrosarcoma specimens expressed RARγ as determined by immunohistochemical staining. 31808569 2019
Entrez Id: 6926
Gene Symbol: TBX3
TBX3
0.010 Biomarker disease BEFREE Importantly, we demonstrate that COL1A2 mediates the pro- and anti-migratory effects of TBX3 in chondrosarcoma and fibrosarcoma cells respectively. 31202624 2019
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.010 Biomarker disease BEFREE While MELTVRs morphologically resemble soft tissue myoepitheliomas and extraskeletal myxoid chondrosarcomas, they have a unique immunohistochemical profile (positive for epithelial membrane antigen and estrogen receptor, negative for S100 protein and glial fibrillary acidic protein, and loss of INI1/SMARCB1 expression), and lack EWSR1 and NR4A3 gene rearrangement, as seen by fluorescence in situ hybridization. 30737997 2019
Entrez Id: 80381
Gene Symbol: CD276
CD276
0.010 AlteredExpression disease BEFREE 4 studies investigated B7-H3 expression in osteosarcoma, but there is no study on B7-H3 expression in chondrosarcoma. 31060912 2019
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.010 Biomarker disease BEFREE Besides, the overexpression of miR-21-5p or silencing of CCR7 obviously reduced the expression levels of p-STAT3, p-p56, and p-IκBα.<b>Conclusion</b>: miR-21-5p targeted CCR7 expression to inhibit the STAT3 and NF-κB signaling, thereby suppressing cell proliferation, migration, invasion, and EMT in CS cells, which might be a novel mechanistic study for CS therapy.<b>Abbreviations</b>: 3'-UTR: 3'-untranslated region; CCR7: C-C chemokine receptor type 7; CS: chondrosarcoma; DMEM: dulbecco's modified eagle's medium; EMT: epithelial-mesenchymal transition; HEK-293T: human embryonic kidney-293T; miR-21-5p: microRNA-21-5p; miR-NC: negative control miRNA; SD: standard deviation; si-CCR7: CCR7 siRNAs. 31813289 2019
Entrez Id: 23135
Gene Symbol: KDM6B
KDM6B
0.010 Biomarker disease BEFREE In the present study, we investigated the antitumoral potential of GSK-J4, a small molecule described as an inhibitor of histone demethylases UTX and JMJD3 (KDM6A and KDM6B), alone or in combination with cisplatin in CSs. 31241814 2019
Entrez Id: 574470
Gene Symbol: MIR525
MIR525
0.010 Biomarker disease BEFREE MicroRNA-525 enhances chondrosarcoma malignancy by targeting F-spondin 1. 30655830 2019
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.010 GeneticVariation disease BEFREE This study demonstrates the capacity of the PARP inhibitor Olaparib to radiosensitize mutated chondrosarcoma cells to conventional photon irradiation, proton and carbon ion irradiation. 31312595 2019
Entrez Id: 1191
Gene Symbol: CLU
CLU
0.010 AlteredExpression disease BEFREE Areas in malignant tenosynovial giant cell tumor resembling pleomorphic spindle cell sarcoma or osteo/chondrosarcoma showed loss of clusterin expression. 30206409 2019
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.010 Biomarker disease BEFREE All rhabdomyosarcomas were positive for desmin and MYF-4.Chondrosarcomas were positive for S100. 31688243 2019
Entrez Id: 574453
Gene Symbol: MIR495
MIR495
0.010 AlteredExpression disease BEFREE Transfection of a miR-495 mimic into rat primary chondrocytes, human chondrocytes (HC) and SW1353 chondrosarcoma cells inhibited AKT1 expression, proliferation and scratch wound closure and induced apoptosis. 31105831 2019
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.010 AlteredExpression disease BEFREE However, this effect was not correlated to EZH2 expression nor activity, and EZH2 knock-down by siRNA did not reduce CS viability. 31613064 2019
Entrez Id: 27185
Gene Symbol: DISC1
DISC1
0.010 AlteredExpression disease BEFREE In immunohistochemical analysis, the rates of positive DAXX, DRD3, and DISC1 expression were significantly higher in chondrosarcoma than in osteochondroma tissue (<i>P</i> < 0.01). 31850367 2019
Entrez Id: 1182
Gene Symbol: CLCN3
CLCN3
0.010 AlteredExpression disease BEFREE RESULTS Results showed that the expression of ClC-3 chloride channel in the normal chondrocyte was thinner, since it showed distinct differentiation among chondrosarcoma specimens. 31281178 2019
Entrez Id: 1616
Gene Symbol: DAXX
DAXX
0.010 GeneticVariation disease BEFREE In competing-risks regression analysis, differentiation (<i>P</i> = 0.005), metastasis (<i>P</i> = 0.014), invasion (<i>P</i> = 0.028), AJCC stage (<i>P</i> = 0.003), Enneking stage (<i>P</i> = 0.036), and DAXX (<i>P</i> = 0.039), and DRD3(<i>P</i> = 0.019) expression were independent predictors of death from chondrosarcoma. 31850367 2019
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.010 Biomarker disease BEFREE Importantly, we demonstrate that COL1A2 mediates the pro- and anti-migratory effects of TBX3 in chondrosarcoma and fibrosarcoma cells respectively. 31202624 2019
Entrez Id: 56848
Gene Symbol: SPHK2
SPHK2
0.010 Biomarker disease BEFREE The phosphorylation of sphingosine by sphingosine kinase enzymes SphK1 and SphK2 generates sphingosine-1-phosphate (S1P), which inhibits human chondrosarcoma cell migration, while SphK1 overexpression suppresses lung metastasis of chondrosarcoma. 31809267 2019
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.010 Biomarker disease BEFREE All rhabdomyosarcomas were positive for desmin and MYF-4.Chondrosarcomas were positive for S100. 31688243 2019
Entrez Id: 28960
Gene Symbol: DCPS
DCPS
0.010 Biomarker disease BEFREE The NCC-dCS1-C1 cell line will be a useful tool for investigations of the mechanisms underlying dedifferentiated chondrosarcomas. 30737713 2019
Entrez Id: 1814
Gene Symbol: DRD3
DRD3
0.010 AlteredExpression disease BEFREE In competing-risks regression analysis, differentiation (<i>P</i> = 0.005), metastasis (<i>P</i> = 0.014), invasion (<i>P</i> = 0.028), AJCC stage (<i>P</i> = 0.003), Enneking stage (<i>P</i> = 0.036), and DAXX (<i>P</i> = 0.039), and DRD3(<i>P</i> = 0.019) expression were independent predictors of death from chondrosarcoma. 31850367 2019
Entrez Id: 5154
Gene Symbol: PDGFA
PDGFA
0.010 AlteredExpression disease BEFREE We sought to determine whether S1P mediates levels of PDGF-A expression and angiogenesis in chondrosarcoma. 31809267 2019