Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 407040
Gene Symbol: MIR34A
MIR34A
0.010 AlteredExpression group BEFREE <b>Conclusions:</b> These results may prove an important role of miR-34a expression as a predictor of apoptosis, even in cases when other risk factors like cytogenetic abnormalities are absent. 31239767 2019
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.010 Biomarker group BEFREE <b>HIGHLIGHTS</b> - Cytogenetic abnormalities and innate immune activation are seen in myelodysplasia- The NLRP3 inflammasome is a core element generating marrow failure of myelodysplasia- In April 2018 methylene blue was reported to potently inhibit NLRP3 inflammasome function- Methylene blue has benign side effects and has been in human use for a century- Study of methylene blue treatment of myelodysplasia would be a low-risk intervention. 30101125 2018
Entrez Id: 26503
Gene Symbol: SLC17A5
SLC17A5
0.010 Biomarker group BEFREE <b>Materials and methods:</b> The effect of five days oral administration of TiO<sub>2</sub>NPs (21 and 80 nm) with different doses (50, 250 and 500 mg/kg body weight) was assessed in mice via measurement of oxidative stress markers; glutathione (GSH), superoxide dismutase (SOD), catalase (CAT), malondialdehyde (MDA) and nitric oxide (NO), liver function indices; aspartate and alanine aminotransferases (AST and ALT), chromosomal aberrations and liver histopathological pattern. 31099265 2019
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker group BEFREE <sup>18</sup>F-FDG PET/CT scanning: Biological effects on patients: Entrance surface dose, DNA damage, and chromosome aberrations in lymphocytes. 30678829 2019
Entrez Id: 6711
Gene Symbol: SPTBN1
SPTBN1
0.020 Biomarker group BEFREE (3) The mean indices for chromosomal aberrations and micronuclei end-points in ELF-EMF-exposed and control cells were within the spontaneous levels reported in historical database. 19296340 2009
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 GeneticVariation group BEFREE * Imatinib inhibits the breakpoint cluster region-Abelson (BCR-ABL) tyrosine kinase, which is produced by the chromosomal abnormality known as the Philadelphia (Ph) chromosome in patients with Ph chromosome-positive acute lymphoblastic leukaemia (Ph+ ALL). 18034597 2007
Entrez Id: 100310785
Gene Symbol: ALL1
ALL1
0.050 GeneticVariation group BEFREE 11q23 translocations (t(11q23)) are recurring cytogenetic abnormalities in both acute myeloid leukemia (AML) and acute lymphoblastic leukemia, involving the same gene, ALL1 (or MLL). 9529125 1998
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.100 GeneticVariation group BEFREE 11q23 translocations (t(11q23)) are recurring cytogenetic abnormalities in both acute myeloid leukemia (AML) and acute lymphoblastic leukemia, involving the same gene, ALL1 (or MLL). 9529125 1998
Entrez Id: 5371
Gene Symbol: PML
PML
0.040 GeneticVariation group BEFREE 5' (bcr 3) breakpoints in PML were over represented among the group and three patients had complex cytogenetic abnormalities suggesting both factors may increase the risk of relapse. 8558940 1996
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.100 GeneticVariation group BEFREE 8q24/MYC rearrangement is a recurrent cytogenetic abnormality in blastic plasmacytoid dendritic cell neoplasms. 29407586 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation group BEFREE Cytogenetic aberrations were confirmed using fluorescent in situ hybridization with probes for the MDR gene and the tumor suppressor genes p16 and DCC. 10027410 1999
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.040 GeneticVariation group BEFREE Cytogenetic aberrations were confirmed using fluorescent in situ hybridization with probes for the MDR gene and the tumor suppressor genes p16 and DCC. 10027410 1999
Entrez Id: 2946
Gene Symbol: GSTM2
GSTM2
0.060 GeneticVariation group BEFREE Chromosomal aberrations in humans induced by urban air pollution: influence of DNA repair and polymorphisms of glutathione S-transferase M1 and N-acetyltransferase 2. 10207633 1999
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.100 Biomarker group BEFREE Chromosome abnormalities and MLL rearrangements in acute myeloid leukemia of infants. 10400416 1999
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.030 GeneticVariation group BEFREE Cytogenetic abnormalities were found in 81 of 2,757 cases (2.93%) screened for both cytogenetic and FMR-1 mutations because of mental retardation from 1992 to 1997. 10495929 1999
Entrez Id: 106478973
Gene Symbol: FMR1-IT1
FMR1-IT1
0.010 GeneticVariation group BEFREE Cytogenetic abnormalities were found in 81 of 2,757 cases (2.93%) screened for both cytogenetic and FMR-1 mutations because of mental retardation from 1992 to 1997. 10495929 1999
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.010 GeneticVariation group BEFREE Cytogenetic abnormalities were found in 81 of 2,757 cases (2.93%) screened for both cytogenetic and FMR-1 mutations because of mental retardation from 1992 to 1997. 10495929 1999
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker group BEFREE Chromosomal aberrations were mostly found in older pts (12/14 >60 years; p=0.03) and in pts with CD34 positive leukemic blasts (13/14 coexpressed CD34, p=0.0004). 11426533 2001
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.090 GeneticVariation group BEFREE Chromosomal aberrations in malignant gastrointestinal stromal tumors: correlation with c-KIT gene mutation. 11454425 2001
Entrez Id: 7486
Gene Symbol: WRN
WRN
0.030 Biomarker group BEFREE Chromosomal aberrations were also synergistically increased in WRN(-/-)/BLM(-/-) cells when irradiated with UV light in late S to G(2) phases. 11840341 2002
Entrez Id: 641
Gene Symbol: BLM
BLM
0.040 Biomarker group BEFREE Chromosomal aberrations were also synergistically increased in WRN(-/-)/BLM(-/-) cells when irradiated with UV light in late S to G(2) phases. 11840341 2002
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.100 GeneticVariation group BEFREE Chromosomal aberrations under basal conditions and after treatment with X-ray in human lymphocytes as related to the GSTM1 genotype. 11909761 2002
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation group BEFREE Chromosomal aberrations with breakpoints in T-cell receptor (TCR) gene loci are recurrent in several T-cell malignancies. 12682631 2003
Entrez Id: 943
Gene Symbol: TNFRSF8
TNFRSF8
0.070 Biomarker group BEFREE Cytogenetic abnormalities that could play a role in CD30+ CTCL tumour pathogenesis and relapses remain unknown. 14595754 2003
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.100 GeneticVariation group BEFREE Chromosomal aberrations in breast tumors from BRCA1 and BRCA2 germ-line mutation carriers are considerably more frequent than what is seen in sporadic breast tumors. 15521105 2004