Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1317
Gene Symbol: SLC31A1
SLC31A1
0.010 GeneticVariation disease BEFREE It is interesting that SLC31A1 lies closed to BSPRY (B-box and SPRY domain), which is a candidate for involvement with cleft lip and/or palate. 19929093 2009
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 Biomarker disease BEFREE Some of the variants in BSPRY and CCL2 showed significant p values in the cleft lip and/or palate population compared with the control population. 19929093 2009
Entrez Id: 5981
Gene Symbol: RFC1
RFC1
0.010 GeneticVariation disease BEFREE RFC1 variation was over-transmitted to children born with cleft lip only (P = 0.017) carrying mitochondrial DNA haplotypes other than haplotype D. Our results provide a new indication that variation in RFC1 may contribute to cleft lip only. 18797703 2008
Entrez Id: 7497
Gene Symbol: XCE
XCE
0.010 GeneticVariation disease LHGDN Triple X syndrome with rare phenotypic presentation. 18759093 2008
Entrez Id: 10
Gene Symbol: NAT2
NAT2
0.010 GeneticVariation disease LHGDN In case-triads we found an association between a NAT2 haplotype and isolated cleft lip (relative risk of 1.6 with 1 copy of the allele and 2.5 with 2 copies), but with little evidence of interaction with smoking. 18449058 2008
Entrez Id: 79784
Gene Symbol: MYH14
MYH14
0.010 Biomarker disease LHGDN Investigation of MYH14 as a candidate gene in cleft lip with or without cleft palate. 18471249 2008
Entrez Id: 56033
Gene Symbol: BARX1
BARX1
0.010 AlteredExpression disease LHGDN Barx1, growth factors and apoptosis in facial tissue of children with clefts. 18708738 2008
Entrez Id: 2246
Gene Symbol: FGF1
FGF1
0.010 Biomarker disease LHGDN Sequence evaluation of FGF and FGFR gene conserved non-coding elements in non-syndromic cleft lip and palate cases. 17963255 2007
Entrez Id: 8817
Gene Symbol: FGF18
FGF18
0.010 Biomarker disease LHGDN Impaired FGF signaling contributes to cleft lip and palate. 17360555 2007
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.010 GeneticVariation disease BEFREE A mutation of the p63 gene in non-syndromic cleft lip. 16740912 2006
Entrez Id: 6259
Gene Symbol: RYK
RYK
0.010 GeneticVariation disease LHGDN A missense mutation, 1355G>A (Y452C), in RYK was identified in one Vietnamese patient with cleft lip and/or palate. 16681403 2006
Entrez Id: 6259
Gene Symbol: RYK
RYK
0.010 GeneticVariation disease BEFREE A missense mutation, 1355G>A (Y452C), in RYK was identified in one Vietnamese patient with cleft lip and/or palate. 16681403 2006
Entrez Id: 7484
Gene Symbol: WNT9B
WNT9B
0.010 Biomarker disease BEFREE A total of 83 F1 embryos at gestation day 14 (GD 14) from Wnt9b-/+ males crossed with A/WySn females, and 79 BC1 GD 14 embryos from F1 Wnt9b-/clf1 males back-crossed to A/WySn females were observed for CL. 16998816 2006
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.010 GeneticVariation disease BEFREE A mutation of the p63 gene in non-syndromic cleft lip. 16740912 2006
Entrez Id: 2049
Gene Symbol: EPHB3
EPHB3
0.010 Biomarker disease BEFREE Mutation searches for RYK, EPHB2, and EPHB3 were carried out in a large number of Japanese and Vietnamese patients with cleft lip and/or palate and cleft palate only. 16681403 2006
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.010 GeneticVariation disease BEFREE A mutation of the p63 gene in non-syndromic cleft lip. 16740912 2006
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.010 Biomarker disease BEFREE Combined absence of GSTM1 and GSTT1 enzymes among the offspring of smoking mothers was associated with a nearly 6-fold increased risk for cleft lip (6.3; 1.3-42). 16135950 2005
Entrez Id: 2952
Gene Symbol: GSTT1
GSTT1
0.010 GeneticVariation disease BEFREE Combined absence of GSTM1 and GSTT1 enzymes among the offspring of smoking mothers was associated with a nearly 6-fold increased risk for cleft lip (6.3; 1.3-42). 16135950 2005
Entrez Id: 2571
Gene Symbol: GAD1
GAD1
0.010 GeneticVariation disease LHGDN Association between nonsyndromic cleft lip with or without cleft palate and the glutamic acid decarboxylase 67 gene in the Japanese population. 15103710 2004
Entrez Id: 8458
Gene Symbol: TTF2
TTF2
0.010 GeneticVariation disease BEFREE We performed a genetic analysis of the TTF-2 gene in 2 children with congenital hypothyroidism (CH) and cleft palate, 45 children with thyroid dysgenesis, 19 children with isolated cleft palate or cleft lip, 4 patients with thyroid hemiagenesis. 15320969 2004
Entrez Id: 2562
Gene Symbol: GABRB3
GABRB3
0.010 GeneticVariation disease LHGDN Linkage disequilibrium between GABRB3 gene and nonsyndromic familial cleft lip with or without cleft palate. 11810291 2002
Entrez Id: 2066
Gene Symbol: ERBB4
ERBB4
0.010 AlteredExpression disease BEFREE These results suggest erbB4 expression may be associated with normal primary palatogenesis of mice and, conversely, cleft lip may be associated with a deficiency of erbB4 expression during primary palate formation in mice. 9563567 1998
Entrez Id: 602
Gene Symbol: BCL3
BCL3
0.010 GeneticVariation disease BEFREE We detected significant interaction between maternal smoking and the transmission of alleles for markers near TGFA and TGFB3; excess transmission of allele 3 at BCL3 was most significant among cleft lip probands; and the odds ratios for transmission of alleles at D19S178 and THRA1 were significant when ethnic group was included in the model. 9415696 1997
Entrez Id: 7067
Gene Symbol: THRA
THRA
0.010 Biomarker disease BEFREE We detected significant interaction between maternal smoking and the transmission of alleles for markers near TGFA and TGFB3; excess transmission of allele 3 at BCL3 was most significant among cleft lip probands; and the odds ratios for transmission of alleles at D19S178 and THRA1 were significant when ethnic group was included in the model. 9415696 1997
Entrez Id: 9572
Gene Symbol: NR1D1
NR1D1
0.010 Biomarker disease BEFREE We detected significant interaction between maternal smoking and the transmission of alleles for markers near TGFA and TGFB3; excess transmission of allele 3 at BCL3 was most significant among cleft lip probands; and the odds ratios for transmission of alleles at D19S178 and THRA1 were significant when ethnic group was included in the model. 9415696 1997