Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 324
Gene Symbol: APC
APC
0.600 Biomarker group BEFREE Deletion of Dnmt3a in APC((Min/+)) mice reduced colon tumor numbers by ~40%. 24837369 2015
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 Biomarker group BEFREE We examined the functions of HuR and TTP during colon tumorigenesis and their ability to regulate cyclooxygenase (COX-2), a mediator of prostaglandin synthesis that increases in the colon tumor microenvironment. 19208339 2009
Entrez Id: 324
Gene Symbol: APC
APC
0.600 Biomarker group BEFREE Relatively high folate consumption reduced the risk of APC(-) colon tumors, but folate intake was positively associated with APC(+) colon tumors among men. 17116713 2006
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 Biomarker group BEFREE Collectively, our data indicate that COX-2 promotes colon tumor progression, but not initiation, and it does so, in part, by activating EGFR and Akt signaling pathways. 18790560 2009
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE We determined the error spectrum of DNA polymerase beta in the human APC gene under PCR conditions and compared it with the set of mutations reported in human colon tumors. 12036944 2002
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE To study the role of APC in signaling ODC expression, we used the human colon tumor cell line HT29 (wtAPC-/-), which has been stably transfected with a zinc-inducible wild-type APC gene. 12112318 2002
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 Biomarker group BEFREE Cyclooxygenase catalyses a key step in prostaglandin biosynthesis, and recent work suggests that one isoenzyme, COX-2, has important roles in early stages of pregnancy; it also appears to be involved in the somewhat analogous process of colon tumor formation and spread. 9443907 1998
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 AlteredExpression group BEFREE Therefore, we examined the expression of SK1 and COX-2 in rat colon tumors induced by azoxymethane (AOM) and the relationship of these two proteins in normal and malignant intestinal epithelial cells. 16319132 2006
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE Total meat consumption was not associated with the endpoints studied.Meat product (i.e. processed meat) consumption showed a positive association with colon tumours harbouring a truncating APC mutation, whereas beef consumption was associated with an increased risk of colon tumours without a truncating APC mutation (incidence rate ratio (RR) highest versus lowest quartile of intake 1.61, 95% confidence interval (CI) 0.96-2.71, p-trend = 0.04 and 1.58, 95% CI 1.10-2.25, p-trend = 0.01, respectively). 16184469 2005
Entrez Id: 324
Gene Symbol: APC
APC
0.600 Biomarker group BEFREE Although it is weaker than that in Apc gene-deficient mice, it may be linked to colon tumor development. 16478792 2006
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE These results indicate that the colon tumor of the TS patient carries the Ki-ras and APC gene mutations. 9589476 1998
Entrez Id: 324
Gene Symbol: APC
APC
0.600 Biomarker group BEFREE APC(Min) mice fed sucrose had an increased tumor number in the proximal third of the small intestine in both studies and a higher incidence of papillary colon tumors in the 16-wk feeding study (P < or = 0.05). 19116878 2009
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 AlteredExpression group BEFREE Marked increased expression of cyclooxygenase 2 (COX-2), a prostaglandin-synthesizing enzyme that is pharmacologically inhibited by nonsteroid anti-inflammatory-type drugs, is a major early oncogenic event in the genesis of human colon neoplasia. 15574495 2004
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE As most sporadic human colon tumors present adenomatous polyposis coli (APC) gene mutations, considerable effort has gone into developing mice that express mutant Apc alleles that mimic human colon cancer pathogenesis. 30859181 2019
Entrez Id: 324
Gene Symbol: APC
APC
0.600 Biomarker group BEFREE We implemented the assay in four cell models: 1) a comparison of proliferating versus epidermal growth factor-stimulated A431 cells, 2) a comparison of SW480Null (mutant APC) and SW480APC (APC restored) colon tumor cell lines, and 3) a comparison of 10 colorectal cancer cell lines with different genomic abnormalities, and 4) lung cancer cell lines with either susceptibility (11-18) or acquired resistance (11-18R) to the epidermal growth factor receptor tyrosine kinase inhibitor erlotinib. 26631510 2016
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE APC gene mutations have been associated to have a role in colon cancer and since gastric and colon tumors share some common genetic lesions, it is relevant to investigate the role of APC tumor suppressor gene in gastric cancer. 28576136 2017
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 Biomarker group BEFREE No linkage between COX2 and colon neoplasia was found by use of a multipoint model-free linkage analysis (estimate of allele sharing was 0.44; standard error = +/-0.04; 95% confidence interval = 0.36 to 0.52). 11309440 2001
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 AlteredExpression group BEFREE Activation of beta-adrenoceptors and the subsequent stimulation of COX-2, PGE(2), and VEGF expression is perhaps an important mechanism in the tumorigenic action of nicotine on colon tumor growth. 17369603 2007
Entrez Id: 324
Gene Symbol: APC
APC
0.600 GeneticVariation group BEFREE Our findings show that 150 ppm OSU-HDAC42 significantly inhibited small-intestinal polyps (>46%; P < 0.001), with polyp size measuring >1 mm (P < 0.001), and colon tumors (>26%) in APC(min/+)mice, whereas 300 ppm SAHA showed nonsignificant inhibition. 24218540 2014
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 AlteredExpression group BEFREE Interestingly, carcinogenic exposure alone induced multiple colon tumors and increased cyclooxygenase-2 (Ptgs2) expression in Tph1KO mice. 31038736 2019
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.600 AlteredExpression group BEFREE Compounds inhibiting COX-2 transcriptional activity have therefore potentially a chemopreventive property against colon tumor formation. 10433483 1999
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.560 AlteredExpression group BEFREE p53 expression and bcl-2 protein overexpression in rectosigmoid adenomas are associated with advanced histology and a high risk of synchronous advanced proximal colon neoplasm. 9672345 1998
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.560 AlteredExpression group BEFREE Our results showed that: i) a significant relationship exists between apoptosis and genesis of colorectal cancer since, compared to adenomatous polyps and adjacent normal mucosa, cell death is markedly inhibited in tumors (p = 0.01); ii) during colon tumor progression, apoptosis and amplifications of c-myc/c-myb genes are inversely related; iii) Bcl-2 expression is retained in colon tumors even though at a significantly lower level with respect to adenomatous polyps. 11848471 2002
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.560 AlteredExpression group BEFREE These findings suggest an indirect pathway for Bcl-2 over-expression in PhIP-induced colon tumors involving beta-catenin, c-Myc and E2F1. 17404573 2007
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.540 AlteredExpression group BEFREE In contrast to the current paradigm, MMP-9 is expressed equally by cancer and stromal cells within human colon tumors. 16551873 2006