Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
0.010 Biomarker disease BEFREE Gene expression profiling (GEP) defined molecular signatures for AITL and delineated biological and prognostic subgroups within PTCL-NOS (PTCL-GATA3 and PTCL-TBX21). 30782609 2019
Entrez Id: 2091
Gene Symbol: FBL
FBL
0.020 GeneticVariation disease BEFREE MRI-derived measures of liver and spleen stiffness as well as laboratory-based APRI and FIB-4 scores are highly associated with imaging findings of portal hypertension in children and young adults with AILD and thus might be useful for predicting portal hypertension impending onset and directing personalized patient management. 30607435 2019
Entrez Id: 4311
Gene Symbol: MME
MME
0.100 Biomarker disease BEFREE Reexamination and immunohistochemical staining of the previously biopsied lymph node specimen revealed the same clonal population of T cells positive for CD3, CD4, CD10, and programmed cell death protein 1 (PD-1) that was present in the skin and confirmed a diagnosis of AITL. 30372708 2018
Entrez Id: 5133
Gene Symbol: PDCD1
PDCD1
0.010 Biomarker disease BEFREE Reexamination and immunohistochemical staining of the previously biopsied lymph node specimen revealed the same clonal population of T cells positive for CD3, CD4, CD10, and programmed cell death protein 1 (PD-1) that was present in the skin and confirmed a diagnosis of AITL. 30372708 2018
Entrez Id: 238
Gene Symbol: ALK
ALK
0.060 Biomarker disease BEFREE Including extranodal NK/T-cell lymphoma, nasal type (ENKTCL-N), monomorphic epitheliotropic intestinal T-cell lymphoma (MEITL), peripheral T-cell lymphoma, not otherwise specified (PTCL, NOS), anaplastic large-cell lymphoma, ALK+ (ALCL, ALK+) and angioimmunoblastic T-cell lymphoma (AITL). 30317149 2018
Entrez Id: 3135
Gene Symbol: HLA-G
HLA-G
0.010 Biomarker disease BEFREE B2 microglobulin is a novel prognostic marker of Angioimmunoblastic T-cell lymphoma. 30150635 2018
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 Biomarker disease BEFREE Somatic driver mutations have been found in TET2, IDH2, DNMT3A, RHOA, FYN, PLCG1, and CD28, whereas germline susceptibility to AITL has to our knowledge not been studied. 30097855 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.400 GeneticVariation disease BEFREE These results suggest that a combination of immunohistochemistry and AS-PCR or NGS should be considered for the identification of IDH2 mutations in AITL in a routine setting. 29981867 2018
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 Biomarker disease BEFREE Immunological biomarker analysis showed elevated levels of inflammatory cytokines (IL-1β, IFN-γ, TNF-α, IL-8) and immunoglobulin A in the saliva of patients with AILD. 29969462 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.020 Biomarker disease BEFREE ALRN-6924 induced a complete remission in a patient with TP53-wild-type angioimmunoblastic T-cell lymphoma, demonstrating the potential for rapid translation of discoveries from subtype-specific preclinical models. 29789628 2018
Entrez Id: 2475
Gene Symbol: MTOR
MTOR
0.010 GeneticVariation disease BEFREE RhoA G17V mice crossed with <i>Tet2</i><sup>fl/fl</sup>; Vav-Cre<sup>+</sup> mice, which delete <i>Tet2</i> throughout the hematopoietic compartment, developed T-cell lymphomas that retained histologic and immunophenotypic features of AITL and had transcriptional signatures enriched for mechanistic target of rapamycin (mTOR)-associated genes. 29769264 2018
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 4311
Gene Symbol: MME
MME
0.100 Biomarker disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 AlteredExpression disease BEFREE Interestingly, BCL-6 expression was the only T<sub>FH</sub> marker differentially expressed between AITL and PTCL-NOS cases. 29662631 2018
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 AlteredExpression disease BEFREE Interestingly, BCL-6 expression was the only T<sub>FH</sub> marker differentially expressed between AITL and PTCL-NOS cases. 29662631 2018
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.070 AlteredExpression disease BEFREE Interestingly, BCL-6 expression was the only T<sub>FH</sub> marker differentially expressed between AITL and PTCL-NOS cases. 29662631 2018
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.030 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 387
Gene Symbol: RHOA
RHOA
0.400 GeneticVariation disease BEFREE Detection of the G17V RHOA mutations assists prompt and appropriate diagnosis of AITL. 29493850 2018
Entrez Id: 27034
Gene Symbol: ACAD8
ACAD8
0.010 Biomarker disease BEFREE Colonoscopy performance increased from 48% in C1 to 63% in C2 with diagnosis of AILD-IBD increasing from 31% to 52%. 29470284 2018
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.070 Biomarker disease BEFREE We measured the percentage positivity of the T<sub>FH</sub> markers, BCL6 and PD1, in AITL CD4-positive cells to be approximately 26% and 45%, with 12% coexpressing both markers. 29241019 2018
Entrez Id: 238
Gene Symbol: ALK
ALK
0.060 Biomarker disease BEFREE One hundred and fifty-six patients were eligible, comprising PTCL not otherwise specified (NOS) (n = 50, 32.0%), angioimmunoblastic T-cell lymphoma (AITL) (n = 44, 28.2%), anaplastic large-cell lymphoma (ALCL) ALK negative (n = 23, 14.7%), ALCL ALK positive (n = 16, 10.3%), and other (n = 23, 14.7%). 29119842 2018
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 Biomarker disease BEFREE In total, 97 patients with AITL (n=37), PTCL-NOS (n=40), ALK-negative ALCL (n=11), or ALK-positive ALCL (n=9) were treated with CHOP (cyclophosphamide, doxorubicin, vincristine, and prednisone). 29100307 2017
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 Biomarker disease BEFREE In total, 97 patients with AITL (n=37), PTCL-NOS (n=40), ALK-negative ALCL (n=11), or ALK-positive ALCL (n=9) were treated with CHOP (cyclophosphamide, doxorubicin, vincristine, and prednisone). 29100307 2017
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.010 Biomarker disease BEFREE We measured serum levels of IL-5, IL-10, IL-12, and interferon-gamma (IFN-γ) at diagnosis in AITL and other common subtypes of nodal T-cell lymphoma including peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS), ALK-negative anaplastic large cell lymphoma (ALCL) or ALK-positive ALCL between September 2008 and December 2014. 29100307 2017