Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.030 GeneticVariation group BEFREE The study indicates that the NcoI polymorphism in the LT alpha gene can not be used as a genetic marker for the predisposition to inflammatory bowel diseases. 8565658 1995
Entrez Id: 960
Gene Symbol: CD44
CD44
0.030 Biomarker group BEFREE Immune mechanisms, possibly involving cell-surface molecules such as CD44, have been invoked to explain the pathogenesis of inflammatory bowel disease. 7537840 1995
Entrez Id: 3382
Gene Symbol: ICA1
ICA1
0.010 Biomarker group BEFREE None of the patients with autoimmune thyroid disease (n = 20), inflammatory bowel disease (n = 9) or multiple sclerosis (n = 7) had elevated ICA69 antibodies. 7758883 1995
Entrez Id: 374
Gene Symbol: AREG
AREG
0.010 AlteredExpression group BEFREE The pattern of expression of PDGF-beta and cripto was identical to that of EGF-R, whereas the level of mRNA of amphiregulin was the same in active chronic IBD and IBD patients with tumors. 7895532 1995
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.700 Biomarker group BEFREE Our data suggest that tolerance to BsA is an important protective mechanism and that restoration of tolerance intestinal flora by IL-10 and antibodies to IL-12 may be of potential therapeutic utility in patients with inflammatory bowel disease. 8625991 1996
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.700 AlteredExpression group BEFREE Serum concentrations of IL-4 and IL-10 were measured using an ELISA technique, and intestinal IL-4 and IL-10 mRNA was detected by a reverse transcriptase polymerase chain reaction (RT-PCR) in 34 patients with inflammatory bowel disease (IBD) (20 with UC and 14 with CD) and compared to 12 control subjects. 8794795 1996
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.600 GeneticVariation group BEFREE The authors have prospectively studied the secretion of TNF alpha and LT alpha in relation to polymorphisms at positions -308 and -238 in the TNF alpha gene (TNFA), and two polymorphisms in the first intron of the LT alpha gene (LTA), as well as HLA-DR in 30 patients with chronic inflammatory bowel diseases (IBD) and 12 healthy controls. 8668926 1996
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.600 GeneticVariation group BEFREE To investigate potential genetic associations in inflammatory bowel disease at the TNF locus, we studied 75 patients with CD, 73 patients with UC, and 60 ethnically matched controls using microsatellite markers. 8612993 1996
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.600 GeneticVariation group BEFREE The strength of the associations indicates that TNF genes are not markers for the predisposition to suffer from IBD. 8608636 1996
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.300 Biomarker group BEFREE Analysis of spontaneous cytokine production by MLN cells using an enzyme-linked immunospot assay, immunohistochemistry, and reverse transcription/polymerase chain reaction showed a decrease of interleukin 2 (IL-2) but a marked increase of IL-4 and interferon gamma (IFN-gamma) production in TCR-alpha-/- mice with IBD as compared to TCR-alpha-/- mice without IBD and TCR alpha+/- control mice. 8642289 1996
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.260 AlteredExpression group BEFREE The constitutive expression of MUC2 and MUC3 mRNA in inflammatory bowel diseases suggests that these genes may be necessary for maintenance of normal epithelial cell function during inflammation. 8813081 1996
Entrez Id: 3818
Gene Symbol: KLKB1
KLKB1
0.200 Biomarker group RGD Selective plasma kallikrein inhibitor attenuates acute intestinal inflammation in Lewis rat. 8625762 1996
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.100 Biomarker group BEFREE Decreased production of IL-4 in inflammatory bowel disease may cause defective immunosuppressive and anti-inflammatory mechanisms and may contribute to disease pathogenesis. 8964392 1996
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.100 AlteredExpression group BEFREE IL8 gene expression was studied by in situ hybridisation in uninflamed intestinal tissue resected for colon carcinoma (n = 7) and in inflamed colonic tissue resected for IBD (n = 11). 8566866 1996
Entrez Id: 3934
Gene Symbol: LCN2
LCN2
0.100 Biomarker group BEFREE Induction of NGAL synthesis in epithelial cells of human colorectal neoplasia and inflammatory bowel diseases. 8675096 1996
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation group BEFREE To study allelic frequencies of polymorphisms of the interleukin-1 receptor antagonist (IL-1RA) gene and the tumour necrosis factor alpha gene in patients with inflammatory bowel disease. 9014770 1996
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.100 GeneticVariation group BEFREE Preliminary studies examining the association between newly described polymorphisms in the IL-1 gene cluster and IBD have provided new insight into the genetic predisposition to UC. 8899101 1996
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.100 Biomarker group BEFREE Analysis of spontaneous cytokine production by MLN cells using an enzyme-linked immunospot assay, immunohistochemistry, and reverse transcription/polymerase chain reaction showed a decrease of interleukin 2 (IL-2) but a marked increase of IL-4 and interferon gamma (IFN-gamma) production in TCR-alpha-/- mice with IBD as compared to TCR-alpha-/- mice without IBD and TCR alpha+/- control mice. 8642289 1996
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker group BEFREE Analysis of spontaneous cytokine production by MLN cells using an enzyme-linked immunospot assay, immunohistochemistry, and reverse transcription/polymerase chain reaction showed a decrease of interleukin 2 (IL-2) but a marked increase of IL-4 and interferon gamma (IFN-gamma) production in TCR-alpha-/- mice with IBD as compared to TCR-alpha-/- mice without IBD and TCR alpha+/- control mice. 8642289 1996
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.100 AlteredExpression group BEFREE Serum concentrations of IL-4 and IL-10 were measured using an ELISA technique, and intestinal IL-4 and IL-10 mRNA was detected by a reverse transcriptase polymerase chain reaction (RT-PCR) in 34 patients with inflammatory bowel disease (IBD) (20 with UC and 14 with CD) and compared to 12 control subjects. 8794795 1996
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 GeneticVariation group BEFREE Preliminary studies examining the association between newly described polymorphisms in the IL-1 gene cluster and IBD have provided new insight into the genetic predisposition to UC. 8899101 1996
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker group BEFREE Although many of these recently described models of intestinal inflammation have not been thoroughly investigated, several consistent features are present which provide important insights into the role of cytokines in the pathogenesis of intestinal inflammation: (i) entirely distinct genetic alterations of cytokine expression and T-lymphocyte activity can lead to phenotypically similar intestinal inflammation, suggesting that human inflammatory bowel disease could have marked genetic heterogeneity; (ii) dysregulation of any of a number to immunoregulatory molecules can result in intestinal inflammation, illustrating the complexity of the mucosal immune response; (iii) active immunosuppression is critical to maintaining mucosal homeostasis; (iv) interferon-gamma and CD4+ lymphocytes, probably of the TH1 phenotype, are required for progression of chronic intestinal inflammation; (v) monokines are consistently upregulated, but tumour necrosis factor blockade is only partially protective. 8899099 1996
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 Biomarker group BEFREE This article will review current progress in understanding the role of Il-1 and Il-1ra in IBD, as well as discuss recently described polymorphisms in the Il-1 gene cluster and their association with UC and CD. 8899101 1996
Entrez Id: 6863
Gene Symbol: TAC1
TAC1
0.090 Biomarker group BEFREE These findings suggest that changes in SP seem to be the effect rather than the cause of colitis and differ from those observed in human inflammatory bowel diseases. 8923502 1996
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.070 AlteredExpression group BEFREE The increased number of MCP-1 and RANTES mRNA-expressing cells in mucosa from patients with IBD suggests that these cytokines play a role in the pathogenesis of mucosal inflammation. 8683390 1996