Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.330 Biomarker disease BEFREE COX-2 would serve as SEB of oral leukoplakia. 20599939 2010
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.330 GeneticVariation disease BEFREE After adjusting for possible confounding factors, COX-2 -765C allele vs. -765G/G genotype (OR=0.22, 95%CI=0.12-0.39) was a protective factor against OSCC development, but was a risk factor for malignant potential of OSF (OR=3.20, 95%CI=1.32-8.94) and OL (OR=6.73, 95%CI=2.84-19.87). 18234542 2008
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.330 Biomarker disease CTD_human Although COX-2 is commonly overexpressed in a variety of premalignant and malignant conditions including oral leukoplakia and squamous cell carcinoma, relatively little research has compared the effects of various COX-2 inhibitors (celecoxib, NS-398, nimesulide and meloxicam). 18202791 2008
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.330 Biomarker disease BEFREE Although COX-2 is commonly overexpressed in a variety of premalignant and malignant conditions including oral leukoplakia and squamous cell carcinoma, relatively little research has compared the effects of various COX-2 inhibitors (celecoxib, NS-398, nimesulide and meloxicam). 18202791 2008
Entrez Id: 79651
Gene Symbol: RHBDF2
RHBDF2
0.300 Biomarker disease GENOMICS_ENGLAND RHBDF2 mutations are associated with tylosis, a familial esophageal cancer syndrome. 22265016 2012
Entrez Id: 79651
Gene Symbol: RHBDF2
RHBDF2
0.300 Biomarker disease GENOMICS_ENGLAND Analysis of a Finnish family confirms RHBDF2 mutations as the underlying factor in tylosis with esophageal cancer. 22638770 2012
Entrez Id: 3853
Gene Symbol: KRT6A
KRT6A
0.120 GeneticVariation disease BEFREE KRT6A mutations were associated with oral leukokeratosis, hoarseness, youngest age or highest number of fingernails/toenails involvement and walking aids. 31823354 2020
Entrez Id: 3853
Gene Symbol: KRT6A
KRT6A
0.120 GeneticVariation disease BEFREE We observed a higher likelihood of oral leukokeratosis in individuals harboring KRT6A mutations, and a strong association of natal teeth and cysts in carriers of a KRT17 mutation. 22264670 2012
Entrez Id: 3853
Gene Symbol: KRT6A
KRT6A
0.120 Biomarker disease HPO
Entrez Id: 3868
Gene Symbol: KRT16
KRT16
0.110 Biomarker disease BEFREE Pachyonychia congenita type 1 (PC-1) is an autosomal dominant ectodermal dysplasia characterized by hypertrophic nail dystrophy, focal non-epidermolytic palmoplantar keratoderma and variable features of oral leukokeratosis and follicular keratosis. 10232400 1999
Entrez Id: 3868
Gene Symbol: KRT16
KRT16
0.110 Biomarker disease HPO
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE P<sub>A</sub> (P-value of the association test) and ORs (odd ratios) with their corresponding 95% CIs (confidence intervals) were calculated to quantitatively evaluate the influence of TP53 rs1042522 on the susceptibility of patients to OSCC or OL. 30126398 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE However, LOH at 9p, but also mutated TP53 in biopsies of oral leukoplakia have a significant association with malignant transformation and are promising candidate biomarkers to predict the risk for malignant progression. 24120275 2013
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Coexpression of p53 and Ki 67 and lack of c-erbB2 expression in oral leukoplakias in India. 22641442 2012
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Evaluation of COX-2, EGFR, and p53 as biomarkers of non-dysplastic oral leukoplakias. 20599939 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE TP53 gene losses and MYC, ERBB2, CCND1 and EGFR copy number gains and amplifications were detected in a higher proportion in OSCC and lymph node samples than in OLK and OLP samples (P < 0·005). 20662834 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Polymorphisms of p53 were not associated with OSCC development and malignant potential of OPL, OSF, and OL. 18234542 2008
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE A positive association exists between the isolated or combined null genotype of GSTM1 and GSTT1 and oral leukoplakia development and the null GSTT1 genotype shows increased risk of p53 overexpression, in oral leukoplakia. 18507060 2008
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Proteic expression of p53 and cellular proliferation in oral leukoplakias. 15627901 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE The peak of the mitotic and Ki-67 indices and p53 expression shifted basally, possibly as a result of malignant transformation, whilst the peak of apoptosis and the expression of apoptotic-related proteins in oral leukoplakia showed no transformation. 12953781 2003
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE These studies suggest that p53 protein stabilization, or indeed the spectrum of mutations of p53, has no major relationship to the biological characteristics and outcome of oral leukoplakia. 10699986 2000
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Twenty-seven per cent (6/22) of oral leukoplakias showed p53 overexpression. 10621843 1999
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Molecular analysis of the same specimen showed mutations of the p53 gene in 13.3% of OLs and 9, 6% of OSCCs. p53 protein expression was not detected by IHC in 3 out of 7 OSCC with p53 mutations. 9677462 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE The immunohistochemical detection of epithelial p53 protein expression in oral lichen planus (OLP) biopsies was supplemented with molecular analysis for mutations of the p53 gene using the polymerase chain reaction - single stranded conformational polymorphism (PCR-SSCP) technique. p53 protein expression, in the basal epithelial cell layer, as detected by the DO7 and 1801 antibodies, was significantly more frequent in OLP compared with other oral keratoses and normal mucosa, as was the growth fraction. 9725569 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE In the second part of the study, accumulation of p53 protein was determined in 42 archival paraffin-embedded specimens from oral leukoplakia and correlated with the degree of epithelial dysplasia. 7527509 1994