Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.430 Biomarker disease BEFREE Here we aimed to shed light on the role of the NOX2 complex in handling of secondary necrotic cells (SNECs) and associated consequences for inflammation and autoimmunity during lupus. 31349119 2019
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.430 GeneticVariation disease BEFREE Though recent reports suggest that neutrophil extracellular traps (NETs) are a source of antigenic nucleic acids in systemic lupus erythematosus (SLE), we recently showed that inhibition of NETs by targeting the NADPH oxidase complex via cytochrome b-245, β polypeptide (cybb) deletion exacerbated disease in the MRL.Faslpr lupus mouse model. 28515361 2017
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.430 Biomarker disease BEFREE We found that NCF1 and NADPH oxidase 2 (NOX2) complex-derived ROS is an important regulator of several chronic inflammatory disorders by using models for rheumatoid arthritis, multiple sclerosis, psoriasis and psoriasis arthritis, gout, and lupus. 26683156 2016
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.430 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.430 Biomarker disease HPO
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.320 Biomarker disease GENOMICS_ENGLAND CD21 and CD19 deficiency: Two defects in the same complex leading to different disease modalities. 26325596 2015
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.320 GeneticVariation disease BEFREE These data confirm the effects of rs3813946 on CR2 transcription, identifying the 5' UTR to be a novel regulatory element for the CR2 gene in which variation may alter gene function and modify the development of lupus. 22673213 2012
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.320 GeneticVariation disease BEFREE Single-nucleotide polymorphism 1 (rs3813946), located in the 5' untranslated region of the CR2 gene, altered transcriptional activity, suggesting a potential mechanism by which CR2 could contribute to the development of lupus. 17360460 2007
Entrez Id: 717
Gene Symbol: C2
C2
0.320 Biomarker disease GENOMICS_ENGLAND Characterization of type I complement C2 deficiency MHC haplotypes. Strong conservation of the complotype/HLA-B-region and absence of disease association due to linked class II genes. 7901282 1993
Entrez Id: 717
Gene Symbol: C2
C2
0.320 Biomarker disease GENOMICS_ENGLAND Familial discoid lupus erythematosus associated with heterozygote C2 deficiency. 6902670 1980
Entrez Id: 717
Gene Symbol: C2
C2
0.320 GeneticVariation disease BEFREE Hereditary complement (C2) deficiency with discoid lupus erythematosus and idiopathic atrophoderma. 315933 1979
Entrez Id: 717
Gene Symbol: C2
C2
0.320 GeneticVariation disease BEFREE C3 metabolism in a patient with deficiency of the second component of complement (C2) and discoid lupus erythematosus. 1084239 1976
Entrez Id: 727
Gene Symbol: C5
C5
0.300 Biomarker disease GENOMICS_ENGLAND Hereditary deficiency of C5 in association with discoid lupus erythematosus. 1999552 1991
Entrez Id: 64061
Gene Symbol: TSPYL2
TSPYL2
0.300 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 Biomarker disease BEFREE OPN production has been associated with several pathological conditions, including autoimmune diseases (e.g. lupus, multiple sclerosis and rheumatoid arthritis) and cancer. 31126876 2019
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 Biomarker disease BEFREE We further detected five distinct inflammatory and metabolic pathways such as TWEAK, osteopontin, endochondral ossification, fluropyrimidine activity and urea cycle and metabolism of amino groups that significantly contribute to the pathogenesis of lupus (P < 0.05). 26403095 2016
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 Biomarker disease BEFREE OPN has been implicated in the development of murine model of lupus and in humans with SLE. 24917428 2014
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 GeneticVariation disease BEFREE We examined a polymorphism of osteopontin for an association with lupus in humans in an effort to determine whether there is any evidence that a genetic predisposition to altered osteopontin expression might explain the overexpression seen in human SLE patients. 11933203 2002
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 AlteredExpression disease BEFREE Glomerular expression of osteopontin in biopsies of human crescentic glomerulonephritis (N = 25), IgA nephropathy with crescents (N = 2), and diffuse proliferative lupus glomerulonephropathy with crescents (N = 1) was studied by immunohistochemistry, in situ hybridization, and combined immunohistochemistry/in situ hybridization. 10620192 2000
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.150 Biomarker disease HPO
Entrez Id: 6775
Gene Symbol: STAT4
STAT4
0.140 GeneticVariation disease BEFREE Altogether, we present a plausible molecular mechanism for increased lupus risk at the STAT1-STAT4 locus in which the risk allele of rs11889341, the most probable causal variant, leads to elevated STAT1 expression in B cells due to decreased repressor activity mediated by increased binding of HMGA1. 29912393 2018
Entrez Id: 6775
Gene Symbol: STAT4
STAT4
0.140 Biomarker disease BEFREE A redundant epistatic interaction between IRF5 and STAT4 of the type I interferon pathway in susceptibility to lupus and rheumatoid arthritis. 24014567 2013
Entrez Id: 712
Gene Symbol: C1QA
C1QA
0.140 GeneticVariation disease BEFREE The identification of new mutation in C1qA gene that disrupts the start codon (ATG to AGG (Met1Arg)) has not been reported previously and it expands the knowledge and importance of the C1q gene in the pathogenesis of lupus especially in the high-risk African-American population. 22472776 2012
Entrez Id: 6775
Gene Symbol: STAT4
STAT4
0.140 Biomarker disease BEFREE Further, we confirmed the genetic association between lupus and 5 additional lupus susceptibility loci (ITGAM, MSH5, CFB, STAT4, and FCGR2A; P = 7.5 × 10⁻¹¹, P = 5.2 × 10⁻⁸, P = 8.7 × 10⁻⁷ , P = 0.0058, and P = 0.0070, respectively), and provided evidence, for the first time, of genome-wide significance for the association between lupus in African American patients and ITGAM and MSH5 (HLA region). 21792837 2011
Entrez Id: 712
Gene Symbol: C1QA
C1QA
0.140 Biomarker disease BEFREE The C1QA gene is associated with subphenotypes of lupus in the African-American and Hispanic subjects. 19440201 2009