Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4644
Gene Symbol: MYO5A
MYO5A
0.030 GeneticVariation disease BEFREE The results showed that: 1) in one case of squamous cell carcinoma with invasion, the number of chromosomal abnormalities was much greater in the invasive than in non-invasive parts, with marked topographical heterogeneities; 2) the DNA-ploidies were largely shifted to the higher side with aneuploid stem-lines and polyploid cells in the invasive parts of all malignant tumors; 3) the expression of HLA-DR was induced at the invasive fronts of malignant melanomas; 4) the GS-I specific sugar residue(D-galactose) appeared in all extra-mammary Paget's cells; and 5) expression of "oncogenes" was found in about 60% of all malignant tumors examined. 1281011 1992
Entrez Id: 8226
Gene Symbol: PUDP
PUDP
0.010 GeneticVariation disease BEFREE The results showed that: 1) in one case of squamous cell carcinoma with invasion, the number of chromosomal abnormalities was much greater in the invasive than in non-invasive parts, with marked topographical heterogeneities; 2) the DNA-ploidies were largely shifted to the higher side with aneuploid stem-lines and polyploid cells in the invasive parts of all malignant tumors; 3) the expression of HLA-DR was induced at the invasive fronts of malignant melanomas; 4) the GS-I specific sugar residue(D-galactose) appeared in all extra-mammary Paget's cells; and 5) expression of "oncogenes" was found in about 60% of all malignant tumors examined. 1281011 1992
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.400 Biomarker disease BEFREE Tumor necrosis factor--stimulated melanoma cells bound more VLA-4-expressing cells (melanoma and monocytes) than resting tumor cells and anti-VCAM-1 monoclonal antibodies significantly inhibited binding, thus suggesting that surface VCAM-1 on melanoma is functional. 1281617 1992
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.100 Biomarker disease BEFREE Although, unlike ICAM-1, VCAM-1 is not correlated with tumor progression, its expression in a fraction of primary melanomas indicates that it may play a role in regulating host immune response and homotypic interactions in some malignant melanomas. 1281617 1992
Entrez Id: 7412
Gene Symbol: VCAM1
VCAM1
0.100 AlteredExpression disease BEFREE Although, unlike ICAM-1, VCAM-1 is not correlated with tumor progression, its expression in a fraction of primary melanomas indicates that it may play a role in regulating host immune response and homotypic interactions in some malignant melanomas. 1281617 1992
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.400 Biomarker disease BEFREE After interleukin-2 expansion of TIL from renal and lung carcinoma and melanoma biopsy tissues, rearrangements of TCR beta-chain genes were analyzed by Southern blotting. 1314129 1992
Entrez Id: 2247
Gene Symbol: FGF2
FGF2
0.100 AlteredExpression disease BEFREE Our findings suggest that activation of Met in response to HGF/SF may contribute to malignant progression synergistically with the aberrant expression of bFGF in malignant melanocytes and that, in addition, the peptide may promote dispersion of factor-dependent melanocytes from early stages of primary melanomas to ectopic sites. 1331934 1992
Entrez Id: 967
Gene Symbol: CD63
CD63
0.100 GeneticVariation disease BEFREE The sequence of the ocular melanoma-associated antigen is identical to the sequence of a recently reported cutaneous melanoma-associated antigen, substantiating our previous studies regarding common antigens between ocular and cutaneous melanoma. 1339263 1992
Entrez Id: 4320
Gene Symbol: MMP11
MMP11
0.010 AlteredExpression disease BEFREE Stromelysin 3 expression was either undetectable or extremely weak in all five cases of infiltrative malignant melanoma. 1342967 1992
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.100 AlteredExpression disease BEFREE Because expression of ICAM-1 in melanoma was found to correlate with increased risk of metastasis, the regulation of ICAM-1 expression on human melanocytes and melanoma cells was investigated. 1347555 1992
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.100 GeneticVariation disease BEFREE We failed to find more than one copy of ERBB-2 in 34 patients with lung cancers, 6 with sarcomas and 3 with melanomas. 1349430 1992
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.100 AlteredExpression disease BEFREE Analysis of the distribution in the melanoma cell lines of retinoic acid receptors (RARs) showed a relationship between susceptibility to a RA-mediated increase of ICAM-1 expression and RAR beta expression, suggesting that the latter receptor may play a role in the phenomenon. 1355009 1992
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.100 Biomarker disease BEFREE Heterogeneous susceptibility of human melanoma clones to monocyte cytotoxicity: role of ICAM-1 defined by antibody blocking and gene transfer. 1355429 1992
Entrez Id: 4830
Gene Symbol: NME1
NME1
0.100 Biomarker disease BEFREE In concordance with previous data the association found here between low levels of nm23 mRNA and the malignant potential of melanomas suggests that the nm23 gene may be implicated in the mechanism of disease progression in some types of human cancer. 1356624 1992
Entrez Id: 182
Gene Symbol: JAG1
JAG1
0.020 GeneticVariation disease BEFREE Elevated levels of the GCF mRNA were also noted in KATO III and AGS (gastric carcinomas), FEM-X (melanoma), and U266B1 (myeloma) cell lines. 1370479 1992
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.500 Biomarker disease BEFREE We found that, while c-Kit protein was readily observed in normal human neonatal and adult melanocytes, the majority of cell lines established from human melanoma samples did not express detectable levels of c-kit mRNA or protein. 1371338 1992
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.100 Biomarker disease BEFREE Five early genes associated with IL-1 action in the melanoma cells were isolated by differential screening of a cDNA library, which was enriched for sequences representing IL-1 responsive genes (IRGs). 1372901 1992
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 Biomarker disease BEFREE Five early genes associated with IL-1 action in the melanoma cells were isolated by differential screening of a cDNA library, which was enriched for sequences representing IL-1 responsive genes (IRGs). 1372901 1992
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.390 AlteredExpression disease BEFREE Using two-domain-specific anti-tenascin monoclonal antibodies, we have studied the expression and distribution of tenascin in four cultured normal human fibroblasts, two simian-virus-40-(SV40)-transformed and three tumor-derived (melanoma, rhabdomyosarcoma and fibrosarcoma) cell lines. 1374030 1992
Entrez Id: 3685
Gene Symbol: ITGAV
ITGAV
0.100 AlteredExpression disease BEFREE Thus, integrin alpha v gene expression and the resulting adhesive phenotype are directly involved in the proliferation of human melanoma in vivo. 1376331 1992
Entrez Id: 3678
Gene Symbol: ITGA5
ITGA5
0.100 AlteredExpression disease BEFREE Thus, integrin alpha v gene expression and the resulting adhesive phenotype are directly involved in the proliferation of human melanoma in vivo. 1376331 1992
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.500 Biomarker disease BEFREE To determine whether human tumor cell lines display c-kit receptors, we performed binding experiments with 125I-SCF on a breast carcinoma cell line (Du4475), a gastric carcinoma cell line (KATO III), a melanoma cell line (HTT144), as well as two small cell lung carcinoma cell lines (H69 and H128). 1378316 1992
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.400 AlteredExpression disease BEFREE Thus, in melanoma cells like Cmel with a high constitutive expression of the c-myc oncogene, the antiproliferative action of rIFN-gamma and rTNF-alpha may be mediated by an inhibition of the expression of c-myc. 1389476 1992
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.400 AlteredExpression disease BEFREE Downmodulation of c-myc expression by interferon gamma and tumour necrosis factor alpha precedes growth arrest in human melanoma cells. 1389476 1992
Entrez Id: 7299
Gene Symbol: TYR
TYR
0.500 AlteredExpression disease BEFREE This 39-bp core element was then confirmed to direct the melanoma cell-specific expression of the reporter gene under the tyrosinase gene promoter. 1400379 1992