Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2597
Gene Symbol: GAPDH
GAPDH
0.070 AlteredExpression disease BEFREE "Housekeeping" genes such as glyceraldehyde 3-phosphate dehydrogenase were expressed at similar levels in melanoma and nevi. 12544092 2003
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 Biomarker disease BEFREE "The role of next-generation sequencing to determine appropriateness of anti-PD1/PD-L1 therapy needs further investigation, but has shown promise in predicting response and survival in melanoma and urothelial carcinoma." 28861116 2017
Entrez Id: 558
Gene Symbol: AXL
AXL
0.090 Biomarker disease BEFREE > 50% of melanomas progress with enriched "AXL-high" populations, and because AXL is linked to de-differentiation and invasiveness avoiding an "AXL-high relapse" is desirable. 28606996 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
1.000 GeneticVariation disease BEFREE <b>Background</b>: Approximately 50% of melanomas harbor BRAF mutations. 29721378 2018
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 AlteredExpression disease BEFREE <b>Conclusion:</b> In conclusion, rapamycin suppresses angiogenesis and lymphangiogenesis in melanoma by blocking the mTOR signal pathway and subsequently downregulating the expression of VEGF-A/VEGFR-2 and VEGF-C/VEGFR-3. 31354297 2019
Entrez Id: 7424
Gene Symbol: VEGFC
VEGFC
0.400 AlteredExpression disease BEFREE <b>Conclusion:</b> In conclusion, rapamycin suppresses angiogenesis and lymphangiogenesis in melanoma by blocking the mTOR signal pathway and subsequently downregulating the expression of VEGF-A/VEGFR-2 and VEGF-C/VEGFR-3. 31354297 2019
Entrez Id: 2911
Gene Symbol: GRM1
GRM1
0.100 Biomarker disease BEFREE <b>Conclusion:</b> The non-toxic radiopharmaceuticals <sup>131</sup>I-IITM and <sup>211</sup>At-AITM are useful high-precision TRT agents that can be used to target the oncoprotein mGluR1 for melanoma therapy. 31451486 2020
Entrez Id: 2346
Gene Symbol: FOLH1
FOLH1
0.010 AlteredExpression disease BEFREE <b>Conclusion:</b> These results indicate that PSMA expression in nonprostatic tumors may not be limited to the endothelium but may also include solid tumor tissue of nonprostatic cancers including melanoma and SCLC. 29025989 2018
Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
0.100 Biomarker disease BEFREE <b>Conclusion:</b> These results suggest that haspin can be considered as a viable anti-melanoma target, and that concomitant inhibition of haspin and MEK activities with small molecules could represent a novel therapeutic strategy with improved efficacy for treatment of melanoma. 28928884 2017
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.500 Biomarker disease BEFREE <b>Conclusion:</b> WDL suppressed cell proliferation and regulated MV3 cell-cycle proteins through AKT and AMPK signaling in melanoma. 30252545 2019
Entrez Id: 7058
Gene Symbol: THBS2
THBS2
0.030 Biomarker disease BEFREE <b>Conclusions:</b> In this study, we suggest that bone metastasis in melanoma might be related to AL118506.1 and its role in regulating thrombospondin 2 and T follicular helper cells. 31608101 2019
Entrez Id: 83737
Gene Symbol: ITCH
ITCH
0.030 Biomarker disease BEFREE <b>Conclusions:</b> We concluded that ITCH may downregulate GLUT1 and suppresses glucose uptake in melanoma to inhibit cancer cell proliferation. 31403357 2019
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.100 Biomarker disease BEFREE <b>Conclusions:</b> We concluded that ITCH may downregulate GLUT1 and suppresses glucose uptake in melanoma to inhibit cancer cell proliferation. 31403357 2019
Entrez Id: 6490
Gene Symbol: PMEL
PMEL
0.400 Biomarker disease BEFREE <b>Methods:</b> We used branched polyamidoamine (PAMAM) dendrimers as scaffold for melanoma specific gp100 synthetic long peptides and the common DC-SIGN and Langerin ligand Lewis Y (Le<sup>Y</sup>), to create multivalent glyco-dendrimers with varying molecular weights for investigating dual DC-SIGN and Langerin targeting. 31534520 2019
Entrez Id: 50489
Gene Symbol: CD207
CD207
0.020 GeneticVariation disease BEFREE <b>Methods:</b> We used branched polyamidoamine (PAMAM) dendrimers as scaffold for melanoma specific gp100 synthetic long peptides and the common DC-SIGN and Langerin ligand Lewis Y (Le<sup>Y</sup>), to create multivalent glyco-dendrimers with varying molecular weights for investigating dual DC-SIGN and Langerin targeting. 31534520 2019
Entrez Id: 1111
Gene Symbol: CHEK1
CHEK1
0.070 GeneticVariation disease BEFREE <b>Purpose:</b> Checkpoint kinase 1 inhibitors (CHEK1i) have single-agent activity <i>in vitro</i> and <i>in vivo</i> Here, we have investigated the molecular basis of this activity.<b>Experimental Design:</b> We have assessed a panel of melanoma cell lines for their sensitivity to the CHEK1i GNE-323 and GDC-0575 <i>in vitro</i> and <i>in vivo</i> The effects of these compounds on responses to DNA replication stress were analyzed in the hypersensitive cell lines.<b>Results:</b> A subset of melanoma cell lines is hypersensitive to CHEK1i-induced cell death <i>in vitro</i>, and the drug effectively inhibits tumor growth <i>in vivo</i> In the hypersensitive cell lines, GNE-323 triggers cell death without cells entering mitosis. 29535131 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
1.000 GeneticVariation disease BEFREE <b>Purpose:</b> BRAF inhibitors are clinically active in patients with advanced BRAF<sup>V600</sup>-mutant melanoma, although acquired resistance remains common. 29674508 2018
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.500 AlteredExpression disease BEFREE <b>Purpose:</b> c-KIT overexpression is well recognized in cancers such as gastrointestinal stromal tumors (GIST), small cell lung cancer (SCLC), melanoma, non-small cell lung cancer (NSCLC), and acute myelogenous leukemia (AML). 29764854 2018
Entrez Id: 5047
Gene Symbol: PAEP
PAEP
0.070 Biomarker disease BEFREE <b>Purpose:</b> Pembrolizumab monotherapy, ipilimumab monotherapy, and pegylated interferon alfa-2b (PEG-IFN) monotherapy are active against melanoma and renal cell carcinoma (RCC). 29358500 2018
Entrez Id: 64135
Gene Symbol: IFIH1
IFIH1
0.100 Biomarker disease BEFREE <b>Purpose:</b> Polyinosinic-polycytidylic acid-poly-l-lysine carboxymethylcellulose (poly-ICLC), a synthetic double-stranded RNA complex, is a ligand for toll-like receptor-3 and MDA-5 that can activate immune cells, such as dendritic cells, and trigger natural killer cells to kill tumor cells.<b>Patients and Methods:</b> In this pilot study, eligible patients included those with recurrent metastatic disease in whom prior systemic therapy (head and neck squamous cell cancer and melanoma) failed. 29950349 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
1.000 Biomarker disease BEFREE <b>Purpose:</b> To examine the relationship between immune activity, PD-L1 expression, and tumor cell signaling, in metastatic melanomas prior to and during treatment with targeted MAPK inhibitors.<b>Experimental Design:</b> Thirty-eight tumors from 17 patients treated with BRAF inhibitor (<i>n</i> = 12) or combination BRAF/MEK inhibitors (<i>n</i> = 5) with known PD-L1 expression were analyzed. 28724663 2017
Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
0.100 Biomarker disease BEFREE <b>Purpose:</b> To examine the relationship between immune activity, PD-L1 expression, and tumor cell signaling, in metastatic melanomas prior to and during treatment with targeted MAPK inhibitors.<b>Experimental Design:</b> Thirty-eight tumors from 17 patients treated with BRAF inhibitor (<i>n</i> = 12) or combination BRAF/MEK inhibitors (<i>n</i> = 5) with known PD-L1 expression were analyzed. 28724663 2017
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.700 Biomarker disease BEFREE <b/> Dual MAPK and CDK4/6 targeting is an emerging strategy in melanoma, but toxicity and acquired resistance are limitations. 29716938 2018
Entrez Id: 4057
Gene Symbol: LTF
LTF
0.020 AlteredExpression disease BEFREE <i>In vitro</i> and <i>in vivo</i> cytotoxic activity of human lactoferricin derived antitumor peptide R-DIM-P-LF11-334 on human malignant melanoma. 29069749 2017
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.400 Biomarker disease BEFREE <i>In vivo</i> administration of IAP antagonists and α-GalCer resulted in increased IFNγ and IL-2 production from iNKT cells and decreased tumor burden in a mouse model of melanoma lung metastasis. 29187357 2018