Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.130 GeneticVariation disease BEFREE Although each pair of sisters had the same MECP2 (OMIM*300005) mutation and balanced X-inactivation, one individual from each pair could not speak or walk, and had a profound intellectual deficit (classical Rett syndrome), while the other individual could speak and walk, and had a moderate intellectual disability (Zappella variant). 23468869 2013
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.130 AlteredExpression disease BEFREE De novo MECP2 duplication in two females with random X-inactivation and moderate mental retardation. 21326285 2011
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.130 GeneticVariation disease BEFREE De novo MECP2 frameshift mutation in a boy with moderate mental retardation, obesity and gynaecomastia. 12081720 2002
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.130 Biomarker disease HPO
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.120 Biomarker disease BEFREE MED13L-related intellectual disability is characterized by moderate intellectual disability (ID), speech impairment, and dysmorphic facial features. 29959045 2019
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.120 Biomarker disease BEFREE MED13L haploinsufficiency syndrome has been described in two patients and is characterized by moderate intellectual disability (ID), conotruncal heart defects, facial abnormalities and hypotonia. 24781760 2015
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.120 CausalMutation disease CLINVAR
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.120 Biomarker disease HPO
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.110 GeneticVariation disease BEFREE Two de novo novel mutations in one SHANK3 allele in a patient with autism and moderate intellectual disability. 29423971 2018
Entrez Id: 29123
Gene Symbol: ANKRD11
ANKRD11
0.110 GeneticVariation disease BEFREE On the other hand, patients carrying either deletions encompassing solely ANKRD11 or its loss-of-function variants were reported in association with the KBG syndrome, characterized by a very similar phenotype, including mild-to-moderate intellectual disability, short stature and macrodontia of upper incisors, with inter and intrafamilial variability. 28422132 2017
Entrez Id: 148789
Gene Symbol: B3GALNT2
B3GALNT2
0.110 GeneticVariation disease BEFREE In conclusion, we show that mutations in B3GALNT2 can give rise to a novel MDDG syndrome presentation, characterized by ID associated variably with seizure, but without any apparent muscular involvement. 29273094 2017
Entrez Id: 1741
Gene Symbol: DLG3
DLG3
0.110 GeneticVariation disease BEFREE A maternal aunt had moderate ID and significantly skewed X-inactivation favorably inactivating the normal DLG3 allele. 28777483 2017
Entrez Id: 9968
Gene Symbol: MED12
MED12
0.110 Biomarker disease BEFREE He has mild to moderate intellectual disability and some dysmorphic features seen in MED12-related syndromes. 27286923 2016
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.110 GeneticVariation disease BEFREE A 237-kb deletion covering the entire FMR1 was identified to cause moderate intellectual disability and marked hyperactivity in an 8-year-old boy. 24963073 2015
Entrez Id: 6942
Gene Symbol: TCF20
TCF20
0.110 GeneticVariation disease BEFREE Through exome sequencing in another project, we independently identified a de novo frameshifting mutation of TCF20 in a woman with ASD and moderate intellectual disability. 25228304 2014
Entrez Id: 546
Gene Symbol: ATRX
ATRX
0.110 GeneticVariation disease BEFREE Expanding phenotype of XNP mutations: mild to moderate mental retardation. 12116232 2002
Entrez Id: 546
Gene Symbol: ATRX
ATRX
0.110 Biomarker disease HPO
Entrez Id: 29123
Gene Symbol: ANKRD11
ANKRD11
0.110 Biomarker disease HPO
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.110 Biomarker disease HPO
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.110 Biomarker disease HPO
Entrez Id: 1741
Gene Symbol: DLG3
DLG3
0.110 Biomarker disease HPO
Entrez Id: 6942
Gene Symbol: TCF20
TCF20
0.110 CausalMutation disease CLINVAR
Entrez Id: 148789
Gene Symbol: B3GALNT2
B3GALNT2
0.110 Biomarker disease HPO
Entrez Id: 9968
Gene Symbol: MED12
MED12
0.110 Biomarker disease HPO
Entrez Id: 9024
Gene Symbol: BRSK2
BRSK2
0.100 GeneticVariation disease CLINVAR Deleterious Variation in BRSK2 Associates with a Neurodevelopmental Disorder. 30879638 2019