Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3977
Gene Symbol: LIFR
LIFR
0.010 AlteredExpression group BEFREE Results from human embryo specimens showed that LIFR mRNA expression was significantly down-regulated in spinal cords of human fetuses with neural tube defects compared with normal controls at a gestational age of 24 to 33 weeks. 31638095 2020
Entrez Id: 84619
Gene Symbol: ZGPAT
ZGPAT
0.010 Biomarker group BEFREE We used Moran's I and Getis-Ord Gi* to evaluate spatial clustering for neural tube defects, critical congenital heart defects (CCHDs), and oral clefts among births whose residence geocoded to the ZIP code or finer level. 31820848 2020
Entrez Id: 1613
Gene Symbol: DAPK3
DAPK3
0.010 Biomarker group BEFREE We used Moran's I and Getis-Ord Gi* to evaluate spatial clustering for neural tube defects, critical congenital heart defects (CCHDs), and oral clefts among births whose residence geocoded to the ZIP code or finer level. 31820848 2020
Entrez Id: 79727
Gene Symbol: LIN28A
LIN28A
0.010 Biomarker group BEFREE Using ribosomal protein 24 hypomorphic mice (<i>Rpl24<sup>Bst/+</sup></i> ) as a genetic tool to dampen global protein synthesis, we found that <i>Lin28a<sup>-/-</sup>;Rpl24<sup>Bst/+</sup></i> compound mutants exhibited NTDs resembling those seen in <i>Lin28a/b</i> dKO mice. 31064784 2019
Entrez Id: 429
Gene Symbol: ASCL1
ASCL1
0.010 AlteredExpression group BEFREE We also report that p53S decreased expression of UTX at mRNA and protein level via increasing Xist transcript, result in high female-specific H3K27me3 expression and repressed Mash1 transcription, which facilitating abnormal proliferation, differentiation, and apoptosis, result in the mis-regulation of neurodevelopment and neural tube defects (NTDs). 31523200 2019
Entrez Id: 7403
Gene Symbol: KDM6A
KDM6A
0.010 AlteredExpression group BEFREE We also report that p53S decreased expression of UTX at mRNA and protein level via increasing Xist transcript, result in high female-specific H3K27me3 expression and repressed Mash1 transcription, which facilitating abnormal proliferation, differentiation, and apoptosis, result in the mis-regulation of neurodevelopment and neural tube defects (NTDs). 31523200 2019
Entrez Id: 8359
Gene Symbol: H4C1
H4C1
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 89122
Gene Symbol: TRIM4
TRIM4
0.010 GeneticVariation group BEFREE A rare missense variant (rs76665876) in TRIM4 was found in 3 of the 14 NTD cases but was not related to TRIM4 expression. 30709423 2019
Entrez Id: 8370
Gene Symbol: H4C14
H4C14
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 8367
Gene Symbol: H4C5
H4C5
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 3688
Gene Symbol: ITGB1
ITGB1
0.010 Biomarker group BEFREE We identified four novel loss-of-function variants in three genes, MTHFR, DLC1, and ITGB1, previously associated with NTD. 30415495 2019
Entrez Id: 121504
Gene Symbol: H4-16
H4-16
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 8365
Gene Symbol: H4C8
H4C8
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 8363
Gene Symbol: H4C11
H4C11
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 8362
Gene Symbol: H4C12
H4C12
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 10395
Gene Symbol: DLC1
DLC1
0.010 Biomarker group BEFREE We identified four novel loss-of-function variants in three genes, MTHFR, DLC1, and ITGB1, previously associated with NTD. 30415495 2019
Entrez Id: 796
Gene Symbol: CALCA
CALCA
0.010 Biomarker group BEFREE However, the use of Ctn to screen patients with nodular thyroid disease (NTD) remains controversial. 31192146 2019
Entrez Id: 8368
Gene Symbol: H4C13
H4C13
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 8361
Gene Symbol: H4C6
H4C6
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 4638
Gene Symbol: MYLK
MYLK
0.010 AlteredExpression group BEFREE Furthermore, doubly heterozygous mouse embryos lacking one copy each of Shroom3 and Folr1 exhibit a low rate of neural tube defects and also have lower levels of activated myosin light chain and MLCK. 30670450 2019
Entrez Id: 8294
Gene Symbol: H4C9
H4C9
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.010 Biomarker group BEFREE The frequency of NTD was found 69%.Patients with NTD were older (p = 0.05), with higher baseline IGF-1%ULN (upper limit of normal) (p = 0.01). 30430336 2019
Entrez Id: 554313
Gene Symbol: H4C15
H4C15
0.010 Biomarker group BEFREE Finally, we used LC-ESI-MS and WB to compare whether histone H4 acetylation was different in NTDs. 31612645 2019
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.010 Biomarker group BEFREE This study established the role of transcription factor Sox19b and epigenetic factor EZH2 regulatory network on NSC development, which provides new clues and theoretical guidance for the clinical treatment of neural tube defects. 31842983 2019
Entrez Id: 8450
Gene Symbol: CUL4B
CUL4B
0.010 AlteredExpression group BEFREE Notably, the expression of HOXA10 genes was negatively correlated with CUL4B levels in human anencephaly NTD cases. 30992047 2019