Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 81839
Gene Symbol: VANGL1
VANGL1
0.600 Biomarker group GENOMICS_ENGLAND
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE Because mice appear to show mostly single gene inheritance for NTDs and humans show multifactorial inheritance, mice sometimes have been characterized as a simpler model for the identification and study of NTD genes.But are they a simple model? 27768235 2017
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 Biomarker group BEFREE The beneficial effect of periconceptional folic acid on NTD prevention denotes a vital role for the single-carbon biochemical pathway in NTD genesis. 24013316 2013
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE Among the two communities, Muslim NTD mothers had higher TT genotype showing increased risk for neural tube defects (adjusted OR: 12.9; 95% CI: 1.21-136.8) and lower folic acid supplementation (adjusted OR: 3.5; 95% CI: 1.18-10.22). 21792640 2011
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE Similarly, attention focused on the human homologues of mouse NTD genes has contributed only limited positive findings to date, although an emerging association between genes of the non-canonical Wnt (planar cell polarity) pathway and NTDs provides candidates for future studies. 19808787 2009
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE The inspired suggestion by Smithells that common vitamins might prevent NTDs ignited a decade of biochemical investigations-first exploring the nutritional and metabolic factors related to NTDs, then onto the hunt for NTD genes. 19235830 2009
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 Biomarker group BEFREE Genetic and embryological approaches to studies of neural tube defects: a critical review. NTD Collaborative Group. 10672589 2000
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE Possible interaction of genotypes at cystathionine beta-synthase and methylenetetrahydrofolate reductase (MTHFR) in neural tube defects. NTD Collaborative Group. 10517251 1999
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 Biomarker group BEFREE Genetic correlation of human neural tube defects (NTDs) with NTD genes identified in mouse may unravel predisposing complex traits for assessment of individual risk and treatment in clinical settings. 10545599 1999
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 GeneticVariation group BEFREE The thermolabile variant of methylenetetrahydrofolate reductase (MTHFR) is not a major risk factor for neural tube defect in American Caucasians. The NTD Collaborative Group. 10732818 1997
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 Biomarker group GENOMICS_ENGLAND
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.590 Biomarker group CTD_human
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 GeneticVariation group BEFREE In the father group, MTHFR C677T was a risk factor for NTDs. 31238314 2019
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
0.400 Biomarker group BEFREE We propose that the cell-cycle-promoting effect of folic acid compensates for the loss of Pax3 and thereby prevents cranial NTDs. 31636139 2019
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.400 AlteredExpression group BEFREE Furthermore, doubly heterozygous mouse embryos lacking one copy each of Shroom3 and Folr1 exhibit a low rate of neural tube defects and also have lower levels of activated myosin light chain and MLCK. 30670450 2019
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 GeneticVariation group BEFREE Here, we report on 3 men with hyperhomocysteinemia and the MTHFR C677T homozygous TT genotype that have reproductive histories of fetal NTDs. 30633186 2019
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.400 GeneticVariation group BEFREE For MTHFD1 rs2236225 polymorphism, mothers having GA genotype and A allele exhibited an increased risk of NTDs in the offspring (OR = 2.600, 95%CI: 1.227-5.529; OR = 1.847, 95%CI: 1.047-3.259). 30867013 2019
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
0.400 GeneticVariation group BEFREE In the validation phase, significantly higher methylation levels in the body region of PAX3 were observed in NTD cases than in controls (P = 0.003). 30665459 2019
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.400 AlteredExpression group BEFREE In NTDs, there was an adaptive up-regulation of folate transporters mainly reduced folate carrier (p < 0.001) and folate receptor alpha (p < 0.001). 30941645 2019
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 GeneticVariation group BEFREE MTHFR C677T, but not A1298C, was associated with neural tube defects (OR, 1.24; 95% CI, 1.08-1.42) and Down syndrome (OR, 1.65; 95% CI, 1.39-1.95). 30474229 2019
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.400 Biomarker group BEFREE Folates and FOLR1 are established modifiers of risk for neural tube defects, and binding data indicates DTG is a partial antagonist of FOLR1. 31259764 2019
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 GeneticVariation group BEFREE For MTHFR rs1801133 polymorphism, mothers having TT and CT genotypes were more likely to affect NTDs in the offspring (OR = 4.105, 95%CI: 1.271-13.258; OR = 3.333, 95%CI: 1.068-10.400). 30867013 2019
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 GeneticVariation group BEFREE Low maternal folate concentrations and maternal MTHFR C677T polymorphism are associated with an increased risk for neural tube defects in offspring: a case-control study among Pakistani case and control mothers. 29222906 2019
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.400 Biomarker group BEFREE This study aims to evaluate the association between genetic defects in folate metabolism pathway genes, mainly: Folate hydrolase 1 (FOLH1), Dihydrofolate reductase (DHFR) and Methylenetetrahydrofolate reductase (MTHFR) and neural tube defects from eastern India. 30120883 2018
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.400 GeneticVariation group BEFREE For rs2236225 within MTHFD1, children with allele A or genotype AA had a high NTDs risk (OR=1.500, 95%CI=1.061~2.120; OR=2.862, 95%CI=1.022~8.015, respectively). 29392422 2018