Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4313
Gene Symbol: MMP2
MMP2
0.310 Biomarker disease CTD_human Oral submucous fibrosis: review on aetiology and pathogenesis. 16311067 2006
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.310 Biomarker disease CTD_human Oral submucous fibrosis: review on aetiology and pathogenesis. 16311067 2006
Entrez Id: 100507436
Gene Symbol: MICA
MICA
0.310 Biomarker disease CTD_human Oral submucous fibrosis: review on aetiology and pathogenesis. 16311067 2006
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.300 Biomarker disease CTD_human Oral submucous fibrosis: review on aetiology and pathogenesis. 16311067 2006
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 GeneticVariation disease BEFREE The results indicated that the 5A genotype of MMP3 promoter was associated with the risk of OSF but not OSCC. 16430740 2006
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.330 GeneticVariation disease BEFREE MMP-9 -1562 C>T polymorphism was not associated with the risk of OSCC or OSF. 17617834 2007
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.330 GeneticVariation disease BEFREE After adjusting for possible confounding factors, COX-2 -765C allele vs. -765G/G genotype (OR=0.22, 95%CI=0.12-0.39) was a protective factor against OSCC development, but was a risk factor for malignant potential of OSF (OR=3.20, 95%CI=1.32-8.94) and OL (OR=6.73, 95%CI=2.84-19.87). 18234542 2008
Entrez Id: 2247
Gene Symbol: FGF2
FGF2
0.320 AlteredExpression disease LHGDN The role of basic fibroblast growth factor in oral submucous fibrosis pathogenesis. 18298475 2008
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE We sequenced both MDM2 SNP309 and p53 codon 72 SNP in patients with oral squamous cell carcinoma (OSCC, n=189), oral submucosal fibrosis (OSF, n=70), and 116 controls. 18423915 2008
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.030 GeneticVariation disease BEFREE The PCR study revealed that there is no significant difference in the allelic variants in GSTM1 between OSF and normal, while GSTT1 null gene showed significantly higher frequencies in this precancerous condition. 18573513 2008
Entrez Id: 2952
Gene Symbol: GSTT1
GSTT1
0.030 GeneticVariation disease BEFREE The PCR study revealed that there is no significant difference in the allelic variants in GSTM1 between OSF and normal, while GSTT1 null gene showed significantly higher frequencies in this precancerous condition. 18573513 2008
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.030 Biomarker disease LHGDN Upregulation of HIF-1alpha in malignant transformation of oral submucous fibrosis. 18221327 2008
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.020 GeneticVariation disease BEFREE After adjusting for possible confounding factors, COX-2 -765C allele vs. -765G/G genotype (OR=0.22, 95%CI=0.12-0.39) was a protective factor against OSCC development, but was a risk factor for malignant potential of OSF (OR=3.20, 95%CI=1.32-8.94) and OL (OR=6.73, 95%CI=2.84-19.87). 18234542 2008
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.020 GeneticVariation disease BEFREE After adjusting for possible confounding factors, COX-2 -765C allele vs. -765G/G genotype (OR=0.22, 95%CI=0.12-0.39) was a protective factor against OSCC development, but was a risk factor for malignant potential of OSF (OR=3.20, 95%CI=1.32-8.94) and OL (OR=6.73, 95%CI=2.84-19.87). 18234542 2008
Entrez Id: 4283
Gene Symbol: CXCL9
CXCL9
0.010 Biomarker disease BEFREE The top three up-regulated genes [Loricrin, Cartilage oligomeric matrix protein (COMP), Cys-X-Cys ligand 9 (CXCL9)] with the largest fold changes and the top two down-regulated genes [keratin 19 (KRT19), cytochrome P450 3A5 (CYP 3A5)] with the most significantly differential changes in OSF were chosen as candidate biomarkers. 18768491 2008
Entrez Id: 1577
Gene Symbol: CYP3A5
CYP3A5
0.010 Biomarker disease BEFREE The top three up-regulated genes [Loricrin, Cartilage oligomeric matrix protein (COMP), Cys-X-Cys ligand 9 (CXCL9)] with the largest fold changes and the top two down-regulated genes [keratin 19 (KRT19), cytochrome P450 3A5 (CYP 3A5)] with the most significantly differential changes in OSF were chosen as candidate biomarkers. 18768491 2008
Entrez Id: 332
Gene Symbol: BIRC5
BIRC5
0.010 PosttranslationalModification disease LHGDN The phosphorylation of survivin Thr34 by p34cdc2 in carcinogenesis of oral submucous fibrosis. 18949405 2008
Entrez Id: 1311
Gene Symbol: COMP
COMP
0.010 AlteredExpression disease BEFREE In immunohistochemical results, the expression of Loricrin and COMP showed statistically significant association with histologic grade of OSF (P = 0.03 and 0.006, respectively). 18768491 2008
Entrez Id: 373156
Gene Symbol: GSTK1
GSTK1
0.010 GeneticVariation disease BEFREE This study establishes a distinct quantitative difference between normal oral mucosa (NOM) and OSF in respect to their histological features and GST null gene frequencies. 18573513 2008
Entrez Id: 3880
Gene Symbol: KRT19
KRT19
0.010 Biomarker disease BEFREE The top three up-regulated genes [Loricrin, Cartilage oligomeric matrix protein (COMP), Cys-X-Cys ligand 9 (CXCL9)] with the largest fold changes and the top two down-regulated genes [keratin 19 (KRT19), cytochrome P450 3A5 (CYP 3A5)] with the most significantly differential changes in OSF were chosen as candidate biomarkers. 18768491 2008
Entrez Id: 133482
Gene Symbol: SLCO6A1
SLCO6A1
0.010 GeneticVariation disease BEFREE This study establishes a distinct quantitative difference between normal oral mucosa (NOM) and OSF in respect to their histological features and GST null gene frequencies. 18573513 2008
Entrez Id: 9360
Gene Symbol: PPIG
PPIG
0.010 Biomarker disease BEFREE The top three up-regulated genes [Loricrin, Cartilage oligomeric matrix protein (COMP), Cys-X-Cys ligand 9 (CXCL9)] with the largest fold changes and the top two down-regulated genes [keratin 19 (KRT19), cytochrome P450 3A5 (CYP 3A5)] with the most significantly differential changes in OSF were chosen as candidate biomarkers. 18768491 2008
Entrez Id: 4015
Gene Symbol: LOX
LOX
0.310 GeneticVariation disease BEFREE However, the G/A+A/A of LOX Arg158Gln in OSF patients older than 50 year was statistically significantly higher than controls older than 50 year (odd's ratio: 4.48; 95% CI = 1.58-12.67). 18764858 2009
Entrez Id: 3162
Gene Symbol: HMOX1
HMOX1
0.010 AlteredExpression disease BEFREE Heme oxygenase-1 expression was significantly higher in OSF specimens (P < 0.05) and expressed mainly by fibroblasts, endothelial cells, and inflammatory cells. 19388153 2009
Entrez Id: 7052
Gene Symbol: TGM2
TGM2
0.010 AlteredExpression disease LHGDN Transglutaminase-2 regulation by arecoline in gingival fibroblasts. 19278990 2009