Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10060
Gene Symbol: ABCC9
ABCC9
0.100 Biomarker group HPO
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.030 GeneticVariation group LHGDN A mutation in the variable repeat region of the aggrecan gene (AGC1) causes a form of spondyloepiphyseal dysplasia associated with severe, premature osteoarthritis. 16080123 2005
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.030 GeneticVariation group BEFREE These findings identify an autosomal-recessive skeletal dysplasia and a significant role for the aggrecan C-type lectin domain in regulating endochondral ossification and, thereby, height. 19110214 2009
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.030 Biomarker group BEFREE These findings suggest that giantin plays a pivotal role in coordinated production of aggrecan, link protein and type XI collagen in chondrocytes, and that loss of giantin causes osteochondrodysplasia with disturbance of these ECM components. 29577904 2018
Entrez Id: 54
Gene Symbol: ACP5
ACP5
0.010 GeneticVariation group BEFREE Spondyloenchondrodysplasia (SPENCD) is an autosomal recessive skeletal dysplasia by biallelic mutations in ACP5 gene encoding tartrate-resistant acid phosphatase (TRAP). 30558059 2018
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.100 Biomarker group HPO
Entrez Id: 71
Gene Symbol: ACTG1
ACTG1
0.100 Biomarker group HPO
Entrez Id: 90
Gene Symbol: ACVR1
ACVR1
0.010 GeneticVariation group BEFREE The clinical manifestations, the disease course, and the molecular findings of involvement of ACVR1 gene in this family are suggestive of "FOP variant" or an unusual ACVR1-related skeletal dysplasia. 27182040 2016
Entrez Id: 9719
Gene Symbol: ADAMTSL2
ADAMTSL2
0.300 Biomarker group CTD_human ADAMTSL2 mutations in geleophysic dysplasia demonstrate a role for ADAMTS-like proteins in TGF-beta bioavailability regulation. 18677313 2008
Entrez Id: 27125
Gene Symbol: AFF4
AFF4
0.010 GeneticVariation group BEFREE Using exome sequencing, we discovered missense mutations in AFF4, a core component of the SEC, in three unrelated probands with a new syndrome that phenotypically overlaps Cornelia de Lange syndrome (CdLS) that we have named CHOPS syndrome (C for cognitive impairment and coarse facies, H for heart defects, O for obesity, P for pulmonary involvement and S for short stature and skeletal dysplasia). 25730767 2015
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.100 Biomarker group HPO
Entrez Id: 224
Gene Symbol: ALDH3A2
ALDH3A2
0.100 Biomarker group HPO
Entrez Id: 79796
Gene Symbol: ALG9
ALG9
0.110 Biomarker group HPO
Entrez Id: 79796
Gene Symbol: ALG9
ALG9
0.110 GeneticVariation group BEFREE A novel phenotype in N-glycosylation disorders: Gillessen-Kaesbach-Nishimura skeletal dysplasia due to pathogenic variants in ALG9. 25966638 2016
Entrez Id: 249
Gene Symbol: ALPL
ALPL
0.010 AlteredExpression group LHGDN Neonatal lethal osteochondrodysplasia with low serum levels of alkaline phosphatase and osteocalcin. 15562030 2005
Entrez Id: 139285
Gene Symbol: AMER1
AMER1
0.010 GeneticVariation group BEFREE Germline mutations in WTX cause a sclerosing skeletal dysplasia but do not predispose to tumorigenesis. 19079258 2009
Entrez Id: 56172
Gene Symbol: ANKH
ANKH
0.100 Biomarker group HPO
Entrez Id: 3730
Gene Symbol: ANOS1
ANOS1
0.100 Biomarker group HPO
Entrez Id: 1386
Gene Symbol: ATF2
ATF2
0.200 Biomarker group MGD
Entrez Id: 468
Gene Symbol: ATF4
ATF4
0.010 Biomarker group BEFREE In MCDS mice expressing the Col10a1.pN617K mutation, CBZ reduced the MCDS-associated expansion of the growth plate hypertrophic zone, attenuated enhanced expression of ER stress markers such as Bip and Atf4, increased bone growth, and reduced skeletal dysplasia. 28920921 2017
Entrez Id: 26229
Gene Symbol: B3GAT3
B3GAT3
0.010 GeneticVariation group BEFREE Skeletal dysplasia in a consanguineous clan from the island of Nias/Indonesia is caused by a novel mutation in B3GAT3. 25893793 2015
Entrez Id: 11285
Gene Symbol: B4GALT7
B4GALT7
0.100 Biomarker group HPO
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.300 Biomarker group CTD_human Thiram-induced changes in the expression of genes relating to vascularization and tibial dyschondroplasia. 17954590 2007
Entrez Id: 632
Gene Symbol: BGLAP
BGLAP
0.010 AlteredExpression group LHGDN Neonatal lethal osteochondrodysplasia with low serum levels of alkaline phosphatase and osteocalcin. 15562030 2005
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.010 AlteredExpression group BEFREE Patient-derived skeletal dysplasia induced pluripotent stem cells display abnormal chondrogenic marker expression and regulation by BMP2 and TGFβ1. 24559391 2014