Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker group BEFREE Osteoma-like melorheostosis: a rare type of skeletal dysplasia depicted on FDG PET/CT. 30680447 2019
Entrez Id: 406932
Gene Symbol: MIR140
MIR140
0.010 GeneticVariation group BEFREE Here we describe a neomorphic seed region mutation in the chondrocyte-specific, super-enhancer-associated MIR140 gene encoding microRNA-140 (miR-140) in a novel autosomal dominant human skeletal dysplasia. 30804514 2019
Entrez Id: 4054
Gene Symbol: LTBP3
LTBP3
0.010 GeneticVariation group BEFREE Mutations in LTBP3 have been associated with various types of skeletal dysplasia. 30887145 2019
Entrez Id: 166929
Gene Symbol: SGMS2
SGMS2
0.010 GeneticVariation group BEFREE SGMS2 pathogenic variants underlie a spectrum of skeletal conditions, ranging from isolated osteoporosis to complex skeletal dysplasia, suggesting a critical role for plasma membrane-bound sphingomyelin metabolism in skeletal homeostasis. 30779713 2019
Entrez Id: 9343
Gene Symbol: EFTUD2
EFTUD2
0.010 Biomarker group BEFREE Heterozygous loss of function variants of EFTUD2 was previously reported in MFDM; however, the mechanism underlying EFTUD2-associated skeletal dysplasia remains unclear. 31806011 2019
Entrez Id: 3955
Gene Symbol: LFNG
LFNG
0.010 GeneticVariation group BEFREE A LFNG mutation is reported in a case of spondylocostal dysostosis (SCD), a skeletal dysplasia with severe malformations of vertebra and rib. 30196550 2018
Entrez Id: 8720
Gene Symbol: MBTPS1
MBTPS1
0.010 GeneticVariation group BEFREE The unique combination of these mutations results in a frequency of functional MBTPS1 transcripts of approximately 1%, a finding that is associated with skeletal dysplasia and elevated blood lysosomal enzymes. 30046013 2018
Entrez Id: 89970
Gene Symbol: RSPRY1
RSPRY1
0.010 Biomarker group BEFREE In conclusion; we provide further evidence that Spondyloepimetaphyseal dysplasia Faden-Alkuraya type is a RSPRY1-associated skeletal dysplasia with a distinctive phenotype composed of spondyloepimetaphyseal dysplasia, cono-brachydactyly, and craniosynostosis along with recognizable facial features and intellectual disability. 30063090 2018
Entrez Id: 55699
Gene Symbol: IARS2
IARS2
0.010 Biomarker group BEFREE This study further expands the phenotypic spectrum of IARS2 pathogenic variants to include two patients (patients 2 and 3) with cataract and skeletal dysplasia and no other features of CAGSSS to the possible presentation of the defects in IARS2. 30419932 2018
Entrez Id: 5144
Gene Symbol: PDE4D
PDE4D
0.010 Biomarker group BEFREE Our findings of PDE4D variants in two cases of acroscyphodysplasia support that PDE4D may be responsible for this severe skeletal dysplasia. 30006632 2018
Entrez Id: 56603
Gene Symbol: CYP26B1
CYP26B1
0.010 Biomarker group BEFREE Recently, an autosomal recessive disorder of skeletal dysplasia associated with CYP26B1 was reported in three families, in which the patients were all homozygous variations. 29606097 2018
Entrez Id: 25871
Gene Symbol: NEPRO
NEPRO
0.010 Biomarker group BEFREE Phenotypically, we note that our cohort spans 36 established phenotypic categories by the International Skeletal Dysplasia Nosology, as well as 18 novel skeletal dysplasia phenotypes that could not be classified under these categories, e.g., the novel C3orf17-related skeletal dysplasia. 29620724 2018
Entrez Id: 54
Gene Symbol: ACP5
ACP5
0.010 GeneticVariation group BEFREE Spondyloenchondrodysplasia (SPENCD) is an autosomal recessive skeletal dysplasia by biallelic mutations in ACP5 gene encoding tartrate-resistant acid phosphatase (TRAP). 30558059 2018
Entrez Id: 2535
Gene Symbol: FZD2
FZD2
0.010 GeneticVariation group BEFREE Omodysplasia-2 (OMOD2; OMIM%16475) is a rare autosomal dominant (AD) skeletal dysplasia characterized by shortened humeri, short first metacarpal, craniofacial dysmorphism (frontal bossing, depressed nasal bridge, bifid nasal tip, and long philtrum), and variable degrees of genitourinary anomalies. 29383834 2018
Entrez Id: 4669
Gene Symbol: NAGLU
NAGLU
0.010 GeneticVariation group BEFREE NAGLU and CYP26B1 mutations were related to MPS IIIB and skeletal dysplasia, respectively. 29606097 2018
Entrez Id: 65992
Gene Symbol: DDRGK1
DDRGK1
0.010 AlteredExpression group BEFREE Taken together, these data indicate that loss of DDRGK1 decreases SOX9 expression and causes a human skeletal dysplasia, identifying a mechanism that regulates chondrogenesis via modulation of SOX9 ubiquitination. 28263186 2017
Entrez Id: 9851
Gene Symbol: KIAA0753
KIAA0753
0.010 GeneticVariation group BEFREE We report biallelic pathogenic variants in KIAA0753 in four patients with short-rib type skeletal dysplasia. 29138412 2017
Entrez Id: 468
Gene Symbol: ATF4
ATF4
0.010 Biomarker group BEFREE In MCDS mice expressing the Col10a1.pN617K mutation, CBZ reduced the MCDS-associated expansion of the growth plate hypertrophic zone, attenuated enhanced expression of ER stress markers such as Bip and Atf4, increased bone growth, and reduced skeletal dysplasia. 28920921 2017
Entrez Id: 23443
Gene Symbol: SLC35A3
SLC35A3
0.010 GeneticVariation group BEFREE Congenital disorders of glycosylation, including SLC35A3-CDG, can present as a wide phenotypic spectrum, including skeletal dysplasia. 28777481 2017
Entrez Id: 1277
Gene Symbol: COL1A1
COL1A1
0.010 GeneticVariation group BEFREE Diagnostic conundrums in antenatal presentation of a skeletal dysplasia with description of a heterozygous C-propeptide mutation in COL1A1 associated with a severe presentation of osteogenesis imperfecta. 27549894 2016
Entrez Id: 26005
Gene Symbol: C2CD3
C2CD3
0.010 GeneticVariation group BEFREE Here we describe a third family with novel compound heterozygous C2CD3 mutations in two fetuses with a different clinical presentation, dominated by skeletal dysplasia with no microcephaly. 27094867 2016
Entrez Id: 50485
Gene Symbol: SMARCAL1
SMARCAL1
0.010 GeneticVariation group BEFREE Mutations in SMARCAL1, which encodes a DNA annealing helicase with roles in DNA replication fork restart, DNA repair, and gene expression modulation, cause Schimke immuno-osseous dysplasia (SIOD), an autosomal recessive disease characterized by skeletal dysplasia, renal disease, T-cell immunodeficiency, and arteriosclerosis. 27813696 2016
Entrez Id: 90
Gene Symbol: ACVR1
ACVR1
0.010 GeneticVariation group BEFREE The clinical manifestations, the disease course, and the molecular findings of involvement of ACVR1 gene in this family are suggestive of "FOP variant" or an unusual ACVR1-related skeletal dysplasia. 27182040 2016
Entrez Id: 54187
Gene Symbol: NANS
NANS
0.010 GeneticVariation group BEFREE We identified biallelic mutations in NANS, the gene encoding the synthase for N-acetylneuraminic acid (NeuNAc; sialic acid), in nine individuals with infantile-onset severe developmental delay and skeletal dysplasia. 27213289 2016
Entrez Id: 202018
Gene Symbol: TAPT1
TAPT1
0.010 GeneticVariation group BEFREE Genetic Defects in TAPT1 Disrupt Ciliogenesis and Cause a Complex Lethal Osteochondrodysplasia. 26365339 2015