Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1828
Gene Symbol: DSG1
DSG1
0.100 GeneticVariation disease BEFREE In addition, some sera of Brazilian PF patients or cases with mixed features of PV and PF also reacted with the intracellular domains of Dsg1 or Dsg3. 11154866 2001
Entrez Id: 1828
Gene Symbol: DSG1
DSG1
0.100 GeneticVariation disease BEFREE Further stratification of the patient population by gender, age of disease onset, HLA-type, family history of autoimmune disease, history of anti-desmoglein (anti-Dsg) 3 or anti-Dsg1 antibody response, history of lesion morphology, and disease duration did not uncover significant associations between the PTPN22 1858T allele and PV subgroups. 21585555 2011
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.080 GeneticVariation disease BEFREE HLA-DQB1*05:03 ranks at the top (P = 4·7 × 10<sup>-40</sup> ; odds ratio 12·4) in both subtypes, with significantly different risk allele frequency (RAF<sub>PV</sub> = 34·2% vs. RAF<sub>PF</sub> = 18·8% vs. RAF<sub>control</sub> = 4·4%), whereas HLA-DRB1*14:01 and HLA-DRB1*04:06 are PV specific. 30230522 2019
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.080 GeneticVariation disease BEFREE There is a close immunogenetic association of PV with the human leukocyte antigen (HLA) class II alleles, HLA-DRB1*04:02 and HLA-DQB1*05:03. 29313220 2018
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.080 GeneticVariation disease BEFREE Our findings suggest that HLA-DRB1*04:02, DRB1*14:04, HLA-DQB1* 03:02 and DQB1*05:03 alleles and HLA-DRB1*04:02-DQB1*03:02 and HLA-DRB1*14:04-DQB1*05:03 haplotypes are genetic markers for susceptibility for PV, while DRB1*11 allelic group appears protective in Serbian population. 27072514 2016
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.080 GeneticVariation disease BEFREE For the HLA variants, we confirmed independent genome-wide level risk associations in HLA-DQB1 and HLA-DRB1, with DQB1*05:03 to be the strongest association with PV (P = 8.59 × 10<sup>-68</sup> , OR = 31.16) and PF (P = 4.84 × 10<sup>-17</sup> , OR = 5.64). 30169916 2019
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.060 GeneticVariation disease BEFREE HLA class II antigens and DRB1, DQA1, DQB1 alleles were studied in 16 Italian and in 16 Sardinian patients with pemphigus vulgaris (PV). 9008308 1996
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.060 GeneticVariation disease BEFREE HLA class II (DRB, DQA1 and DQB1) allele and haplotype frequencies in the patients with pemphigus vulgaris. 18780165 2009
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.060 GeneticVariation disease BEFREE We compared high resolution MHC class II alleles and haplotype frequencies (HLA-DRB, DQA1 and DQB1) in 37 patients with PV to 89 haplotypes of normal relatives from New Delhi and Ahmedabad. 9008309 1996
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.050 GeneticVariation disease BEFREE The IL-6 -174 CC genotype represents a marker of increased susceptibility to pemphigus in Egyptian patients and GG genotype can be considered a low-risk genotype; TNF-α -308 A-containing genotypes contribute to the susceptibility to PV only. 22365967 2012
Entrez Id: 9705
Gene Symbol: ST18
ST18
0.050 GeneticVariation disease BEFREE Among the large number of studied SNPs, it was found that several SNPs in different genes might control the susceptibility of PV, including TNFA (rs361525, rs1800629, rs1800629), IL10 (rs1800871, rs1800896, rs1800871, and rs1800872), IL6 (rs1800795), CTLA4 (rs231775), ICOS (rs10932029), CD86 (rs1129055), DSG3 (rs8085532, rs3911655, rs3848485, rs3794925, rs1466379), ST18 (rs2304365, rs17315309) and TAP2 (rs7454108), probably in a population-specific manner. 31342641 2020
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.050 GeneticVariation disease BEFREE Among the large number of studied SNPs, it was found that several SNPs in different genes might control the susceptibility of PV, including TNFA (rs361525, rs1800629, rs1800629), IL10 (rs1800871, rs1800896, rs1800871, and rs1800872), IL6 (rs1800795), CTLA4 (rs231775), ICOS (rs10932029), CD86 (rs1129055), DSG3 (rs8085532, rs3911655, rs3848485, rs3794925, rs1466379), ST18 (rs2304365, rs17315309) and TAP2 (rs7454108), probably in a population-specific manner. 31342641 2020
Entrez Id: 9705
Gene Symbol: ST18
ST18
0.050 GeneticVariation disease BEFREE High-resolution melting analysis to screen the ST18 gene functional risk variant for pemphigus vulgaris: The occasion to open a debate on its usefulness in clinical setting. 30926339 2019
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.040 GeneticVariation disease BEFREE In contrast to the unique distribution of the HLA-B alleles, HLA-A and C alleles were unremarkable in patients with PV when compared with normal control subjects. 11841366 2002
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.040 GeneticVariation disease BEFREE Twenty-one Israeli Jewish pemphigus vulgaris (PV) patients were studied for the HLA-D lymphocyte defined determinants and the serologically defined antigens of the HLA-A, B, and DR series. 6199866 1984
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.040 GeneticVariation disease BEFREE However, four probes, D6S265, C_527, D6S510, and MOGC, which are all mapped to the region of HLA-A, were highly associated with PV. 12878355 2003
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 GeneticVariation disease BEFREE The IL-6 -174 CC genotype represents a marker of increased susceptibility to pemphigus in Egyptian patients and GG genotype can be considered a low-risk genotype; TNF-α -308 A-containing genotypes contribute to the susceptibility to PV only. 22365967 2012
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.030 GeneticVariation disease BEFREE Our preliminary results suggest that certain TNF-alpha and IL-10 gene polymorphisms might contribute to genetic susceptibility to pemphigus vulgaris; however, their overall impact on disease development will be rather limited. 19470040 2010
Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
0.030 GeneticVariation disease BEFREE HLA-Cw*14 may be the predisposing allele to PNP in Chinese patients, which is different from the predisposing allele in French patients with PNP and the alleles predisposing to pemphigus vulgaris and pemphigus foliaceus. 18070207 2008
Entrez Id: 1308
Gene Symbol: COL17A1
COL17A1
0.030 GeneticVariation disease BEFREE In comparison to healthy controls, the following observations were made: (i) Hsp90 was highly expressed in the skin of BP patients, whereas its serum levels were decreased and inversely associated with IgG autoantibody levels against the NC16A immunodominant region of the BP180 autoantigen, (ii) in contrast, neither aberrant levels of circulating Hsp90 nor any correlation of this protein with serum autoantibodies was found in a control cohort of autoimmune bullous disease patients with pemphigus vulgaris, (iii) Hsp90 was highly expressed in and restrictedly released from peripheral blood mononuclear cells of BP patients, and (iv) Hsp90 was potently induced in and restrictedly secreted from human keratinocyte (HaCaT) cells by BP serum and isolated anti-BP180 NC16A IgG autoantibodies, respectively. 23936217 2013
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.030 GeneticVariation disease BEFREE Among the large number of studied SNPs, it was found that several SNPs in different genes might control the susceptibility of PV, including TNFA (rs361525, rs1800629, rs1800629), IL10 (rs1800871, rs1800896, rs1800871, and rs1800872), IL6 (rs1800795), CTLA4 (rs231775), ICOS (rs10932029), CD86 (rs1129055), DSG3 (rs8085532, rs3911655, rs3848485, rs3794925, rs1466379), ST18 (rs2304365, rs17315309) and TAP2 (rs7454108), probably in a population-specific manner. 31342641 2020
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.030 GeneticVariation disease BEFREE In conclusion, it is suggested that HLA-B*44:02, -C*04:01, -C*15:02 alleles and HLA-A*03:01, -B*51:01, -C*16:02 haplotype are susceptibility factors for development of pemphigus vulgaris in the Iranian population, while HLA-C*06:02, -C*18:01 alleles and HLA-A*26:01, -B*38, -C*12:03 haplotype may be considered as protective alleles. 23330836 2013
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.030 GeneticVariation disease BEFREE These results suggest that there may be differences in the ethnic concentrations of different HLA-B alleles in patients with PV. 11841366 2002
Entrez Id: 6891
Gene Symbol: TAP2
TAP2
0.030 GeneticVariation disease BEFREE Two PV TAP2 risk alleles were identified (TAP2*C and TAP2*D), the frequency of which was estimated to be 37.8% in the patients and 5.3 % in the controls. 16690408 2005
Entrez Id: 6891
Gene Symbol: TAP2
TAP2
0.030 GeneticVariation disease BEFREE A fine-mapping analysis of PV risk in the major histocompatibility complex region showed three independent variants predisposed to PV using stepwise analysis: HLA-DRB1*14:04 (P = 2.47 × 10<sup>-38</sup>, odds ratio = 6.28), rs7454108 at the TAP2 gene (P = 2.78 × 10<sup>-12</sup>, odds ratio = 3.25), and rs1051336 at the HLA-DRA gene (P = 3.06 × 10<sup>-6</sup>, odds ratio = 0.33). 29857070 2018