Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5324
Gene Symbol: PLAG1
PLAG1
0.010 AlteredExpression disease BEFREE We observed that PLAG1 mRNA is highly expressed in RMS and is associated with PLAG1 gene copy-number gain. 31757836 2020
Entrez Id: 55789
Gene Symbol: DEPDC1B
DEPDC1B
0.010 AlteredExpression disease BEFREE Expression dynamics of DEPDC1B were examined in murine and human myoblasts and rhabdomyosarcoma cells in vitro by RT-qPCR and/or immunolabelling. 31825138 2020
Entrez Id: 110806263
Gene Symbol: LOC110806263
LOC110806263
0.010 GeneticVariation disease BEFREE The TERT promoter mutations were most frequently present in bladder cancer (68.6%), followed by central nervous system tumors (28.7%), thyroid cancer (15.4%), prostate cancer (9.3%), endometrial carcinoma (3.7%), rhabdomyosarcoma (1.4%), colorectal cancer (1%), epithelial ovarian carcinoma (0.7%) and breast cancer (0.7%). 31669704 2020
Entrez Id: 245806
Gene Symbol: VGLL2
VGLL2
0.010 GeneticVariation disease BEFREE Recent studies have significantly impacted this classification with the emergence of three distinct new subtypes of rhabdomyosarcomas, namely rhabdomyosarcoma with MYOD1 mutations, rhabdomyosarcoma with TFCP2 fusions, and rhabdomyosarcoma with VGLL2/NCOA2 fusions. 31696361 2020
Entrez Id: 23528
Gene Symbol: ZNF281
ZNF281
0.010 AlteredExpression disease BEFREE In addition, we found that in rhabdomyosarcoma and leiomyosarcoma tumors the expression of ZNF281/Zfp281 is significantly higher compared with normal counterparts. 31782884 2020
Entrez Id: 10215
Gene Symbol: OLIG2
OLIG2
0.010 AlteredExpression disease BEFREE Protein expression of OLIG2, a novel marker in RMS, was investigated using antibody EP112 (Cell Marque). 31493794 2019
Entrez Id: 6654
Gene Symbol: SOS1
SOS1
0.010 GeneticVariation disease BEFREE Previous studies have shown that overexpression of the guanine nucleotide exchange factor T (GEFT) is correlated with a poorer RMS prognosis, but the mechanism remains largely unexplored. 31761617 2019
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.010 GeneticVariation disease BEFREE In several of these cases, activation of HH-GLI signaling is mediated by overproduction of HH ligands (e.g., prostate cancer), loss-of-function mutations in <i>PTCH1</i> or gain-of-function mutations in <i>SMO</i>, which occur in the majority of basal cell carcinoma (BCC), SHH-subtype medulloblastoma and rhabdomyosarcoma. 31244888 2019
Entrez Id: 6356
Gene Symbol: CCL11
CCL11
0.010 Biomarker disease BEFREE Finally, we show that the inflammatory genes Ccl11 and Rgs5 are involved in RMS growth. 30650360 2019
Entrez Id: 4659
Gene Symbol: PPP1R12A
PPP1R12A
0.010 Biomarker disease BEFREE Moreover, both a pure alveolar rhabdomyosarcoma and sarcomatoid rhabdomyosarcoma of the urinary bladder demonstrated a fusion involving PPP1R12A. 30946934 2019
Entrez Id: 400668
Gene Symbol: PRSS57
PRSS57
0.010 Biomarker disease BEFREE In human rhabdomyosarcoma (RD) and embryonic kidney (HEK-293T) cell lines coinfected at a 1 : 1 ratio, wild-type nsP4-82R virus was rapidly outcompeted by nsP4-82S virus as early as one passage (3 days). 31613205 2019
Entrez Id: 9104
Gene Symbol: RGN
RGN
0.010 Biomarker disease BEFREE Moreover, ZIKV Natal RGN SRIPs effectively self-replicated in rhabdomyosarcoma/muscle, glioblastoma/astrocytoma, and retinal pigmented epithelial cells, displaying unique cell susceptibility with differential attachment activity. 31683628 2019
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.010 Biomarker disease BEFREE Since both the glycosylation of α-dystroglycan and its function as an ECM receptor require over 18 post-translational processing enzymes, we hypothesized that understanding its role in the pathogenesis of RMS requires a complete analysis of the expression of dystroglycan-modifying enzymes and the characterization of α-dystroglycan glycosylation in the context of RMS. 31054580 2019
Entrez Id: 406974
Gene Symbol: MIR197
MIR197
0.010 AlteredExpression disease BEFREE Here, we show that enterovirus A71 infection in human rhabdomyosarcoma (RD) is regulated by miR-197 expression. 30336044 2019
Entrez Id: 55422
Gene Symbol: ZNF331
ZNF331
0.010 Biomarker disease BEFREE In vivo administration of RITA or GANT61 suppressed rhabdomyosarcoma xenograft growth in nude mice; however, co-administration did not further enhance tumor suppression, even though cell proliferation was decreased. 30447254 2019
Entrez Id: 117581
Gene Symbol: TWIST2
TWIST2
0.010 Biomarker disease BEFREE Knockdown of <i>TWIST2</i> in RMS cells results in up-regulation of <i>MYOGENIN</i> and a decrease in proliferation, implicating TWIST2 as an oncogene in RMS. 30975722 2019
Entrez Id: 8419
Gene Symbol: BFSP2
BFSP2
0.010 Biomarker disease BEFREE Co-localization of antibodies to G8, noggin, filensin and CP49 was observed in most RC13 and a subpopulation of RD human rhabdomyosarcoma cell lines. 30973903 2019
Entrez Id: 6926
Gene Symbol: TBX3
TBX3
0.010 AlteredExpression disease BEFREE We found that TBX3 promotes differentiation only in the presence of early growth response factor 1 (EGR1), which is differentially expressed in RMS and is also a target of the PRC2 complex. 30979887 2019
Entrez Id: 84934
Gene Symbol: RITA1
RITA1
0.010 Biomarker disease BEFREE In vivo administration of RITA or GANT61 suppressed rhabdomyosarcoma xenograft growth in nude mice; however, co-administration did not further enhance tumor suppression, even though cell proliferation was decreased. 30447254 2019
Entrez Id: 7704
Gene Symbol: ZBTB16
ZBTB16
0.010 Biomarker disease BEFREE ZBTB16 effectively differentiates PNETs from other small round blue cell tumor mimics, including the two most common germ cell tumor-derived somatic malignancies - rhabdomyosarcoma and nephroblastoma. 31326195 2019
Entrez Id: 6664
Gene Symbol: SOX11
SOX11
0.010 AlteredExpression disease BEFREE In mesenchymal tumours, in addition to MCLs, prominent SOX11 expression was observed in 90% of rhabdomyosarcomas and all myxoid/round cell liposarcomas (MRCLs). 30221780 2019
Entrez Id: 407008
Gene Symbol: MIR223
MIR223
0.010 AlteredExpression disease BEFREE <i>NOTCH2</i>, <i>FGFR1/2</i> were significantly down-modulated in AYA-RMS. miR-223 was associated with up-regulation of epithelial mesenchymal translation (EMT) and inflammatory pathways, whereas miR-431 was correlated to myogenic differentiation and muscle metabolism. 31533233 2019
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.010 GeneticVariation disease BEFREE The array-CGH profile displayed copy number alterations commonly found in rhabdomyosarcomas. 30945443 2019
Entrez Id: 619554
Gene Symbol: MIR486-1
MIR486-1
0.010 Biomarker disease BEFREE Analysis of human serum samples showed that miR-486-5p is enriched in exosomes of patients with RMS, and follow-up after chemotherapy showed decrease to control values. 31578374 2019
Entrez Id: 664614
Gene Symbol: MIR545
MIR545
0.010 AlteredExpression disease BEFREE We showed that miR-545 was upregulated in the EV71-infected human embryonic kidney (HEK) 293 cells and rhabdomyosarcoma (RD) cells. 30697739 2019