Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.110 Biomarker disease HPO
Entrez Id: 283120
Gene Symbol: H19
H19
0.110 Biomarker disease HPO
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 AlteredExpression disease BEFREE ECs display expression of SOX2, while seminomas display expression of SOX17. 31583686 2020
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 Biomarker disease BEFREE Indeed, CRISPR/Cas9 SOX2-deleted TCam-2 cells were able to maintain a seminoma-cell fate in vivo for about six weeks, but after six weeks in vivo still small sub-populations initiated differentiation. 31130628 2019
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 Biomarker disease BEFREE So, SOX2 is an essential factor in acquiring an EC-like cell fate from seminomas.A small population of differentiated cells was identified resembling a mixed non-seminoma. 27283990 2016
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 Biomarker disease BEFREE Here, we show that SOX2 repression in SEM-derived TCam-2 cells is mediated by the Polycomb repressive complex (PcG) and the repressive H3K27me3 chromatin mark that are enriched at its promoter. 27132888 2016
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 Biomarker disease BEFREE Strikingly, these compounds inhibited the proliferation of pluripotent cancer cells including teratocarcinoma, embryonic carcinoma, and seminoma or embryonic stem cells that express the stem cell markers Oct4 and Sox2 while displaying minimum growth-inhibitory effects on non-pluripotent cancer or normal somatic cells. 21975933 2011
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 AlteredExpression disease BEFREE However, protein expression of OCT3/4 and AP2y was weak and these JKT-1 cells expressed SOX2, a marker of embryonal carcinoma and did not express c-KIT usually expressed in most seminoma. 19226408 2010
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 AlteredExpression disease BEFREE Thus, SOX2 is expressed in embryonal carcinoma and primitive neuroectoderm of teratoma, and unlike OCT3/4, not in intra-tubular germ cell neoplasia and seminoma. 19396148 2009
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 Biomarker disease BEFREE Based on genome-wide expression profiling, SOX17 was found to be present, instead of SOX2, in early germ cells and their malignant counterparts, CIS and seminoma. 18348160 2008
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 AlteredExpression disease BEFREE The most significant difference between seminomas and embryonal carcinomas was the expression of spermatogenesis-associated genes (PRAME, MAGEA4, SPAG1, HPX) in seminomas and regulatory genes DNMT3B and SOX2 as well as small molecular weight keratins KRT8, KRT18 in embryonal carcinomas. 17993720 2008
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.100 AlteredExpression disease BEFREE Embryonic stem cell regulator SOX2 and downstream targets of the Nodal pathway were up-regulated in embryonal carcinoma only but not in IGCNU/seminoma. 17970049 2007
Entrez Id: 23405
Gene Symbol: DICER1
DICER1
0.100 Biomarker disease HPO
Entrez Id: 9817
Gene Symbol: KEAP1
KEAP1
0.100 Biomarker disease HPO
Entrez Id: 412
Gene Symbol: STS
STS
0.100 Biomarker disease HPO
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease CLINVAR
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE Heterogeneity in the copy number of i(12p) and other 12p-derived markers, as well as chromosome 12 aneuploidy, were higher in NS tumors than in SE. 12034520 2002
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE Interphase fluorescence in situ analysis was consistent with this and provided evidence for the i(12p) or 12p11.2-12.1 amplification in the SE and NS but not in the corresponding CIS. 11461079 2001
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE Both the frequency and the number of copies of i(12p) are higher in NS than in SE. 8527395 1995
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE We found the incidence of i(12p) in seminomas to be low (7%) compared to that in nonseminomas (75%) when tumor biopsy specimens were studied by FISH. 1384658 1992
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE The frequency and copy number of i(12p) were found to be higher in nonseminomas compared with seminomas. 1313741 1992
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE Eight tumors had at least one copy of an i(12p) among other chromosomal abnormalities.Two seminomas lacked the i(12p). 2910461 1989
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE An identical abnormal chromosome, i(12p), and a marker chromosome of unknown origin were seen in 2 tumors of different histology (seminoma and embryonal carcinoma) in the same testis. 3352038 1988
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 Biomarker disease BEFREE Together with the previous reports on the presence of i(12p) in seminoma and teratoma of the testis, our findings suggest that this karyotypic abnormality is characteristic for all histologic varieties of germ cell tumors of the testis. 3002602 1986
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.090 GeneticVariation disease BEFREE In the four most favorable tumors (seminomas) this chromosome was identified as an i(12p). 6616439 1983