Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5742
Gene Symbol: PTGS1
PTGS1
0.340 Biomarker disease BEFREE The inhibition of gastric cyclooxygenase 1 (COX-1) enzyme was believed to be the major cause of non-steroidal anti-inflammatory drugs (NSAIDs)-induced gastric ulcer. 27916468 2017
Entrez Id: 7031
Gene Symbol: TFF1
TFF1
0.230 AlteredExpression disease BEFREE The expression of TFF1 and TFF2 was immunohistochemically analyzed in paraffin-embedded samples from 140 patients including 35 cases of chronic superficial gastritis (CSG), 35 cases of gastric ulcer (GU), 35 cases of chronic atrophic gastritis (CAG) and 35 cases of gastric cancer (GC). 16718800 2006
Entrez Id: 7031
Gene Symbol: TFF1
TFF1
0.230 AlteredExpression disease BEFREE We examined TFF1 gene expression at non-ulcerated sites during the healing of a gastric ulcer by semiquantitative determination of the TFF1 mRNA. 10921412 2000
Entrez Id: 7031
Gene Symbol: TFF1
TFF1
0.230 Biomarker disease BEFREE The expression of TFF1 in peripheral mucosa of gastric ulcer is higher than that in mucosa 5 cm beyond the ulcer, indicating that TFF1 plays an important part in protection and restitution of gastric mucosa. 17143957 2006
Entrez Id: 4586
Gene Symbol: MUC5AC
MUC5AC
0.220 Biomarker disease BEFREE Current study was designed to understand the gastric ulcer healing mechanism of rhamnogalacturonan-I type pectic polysaccharide of black cumin (BCPP) utilizing acetic acid induced gastric ulcers in rats.BCPP fed groups at 200mg/kg b.w. for 10days showed up to 85% healing of gastric ulcers with modulation of key molecular events involved in ulcer healing process such as increase in gastric mucin content, cyclooxygenase-2 (Cox-2) and prostaglandin E<sub>2</sub> (PGE<sub>2</sub>). 28322956 2017
Entrez Id: 4586
Gene Symbol: MUC5AC
MUC5AC
0.220 Biomarker disease BEFREE All the active compounds inhibited the formation of gastric ulcers and increased the formation of gastric mucin secretion. 29792357 2018
Entrez Id: 7010
Gene Symbol: TEK
TEK
0.210 AlteredExpression disease BEFREE IL-11 up-regulates Tie-2 expression during the healing of gastric ulcers in rats. 12679933 2003
Entrez Id: 183
Gene Symbol: AGT
AGT
0.210 GeneticVariation disease BEFREE We assessed the AGT-20 A/C polymorphism in Helicobacter pylori-positive patients with gastric cancer (n = 135), gastric ulcer (n = 148) and duodenal ulcer (n = 113) and controls (n = 292) consisting of H.pylori-positive gastritis alone (n = 160) and H.pylori-negative subjects (n = 132). 17389608 2007
Entrez Id: 4588
Gene Symbol: MUC6
MUC6
0.210 Biomarker disease BEFREE We observed that the molar content of MUC6 mucin doubled (without significance) in mucus from patients with duodenal ulcer, and increased five times (with high significance) in mucus from patients with gastric ulcer, when compared with that in mucus from individuals without gastroduodenal disease. 23643621 2013
Entrez Id: 6750
Gene Symbol: SST
SST
0.210 Biomarker disease BEFREE The effects of DNJ on gastric functions were explored by measuring the changes of Motilin (MOT), Substance P (SP), Somatostatin (SS), and Vasoactive intestinal peptide (VIP) in GU mouse models with ELISA Kits. 29725297 2018
Entrez Id: 284
Gene Symbol: ANGPT1
ANGPT1
0.210 AlteredExpression disease BEFREE These studies demonstrated that a single local injection of plasmids expressing vascular endothelial growth factor and angiopoietin-1 dramatically accelerates the healing of duodenal, gastric and esophageal gastric ulcers. 16628261 2006
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 AlteredExpression disease BEFREE We constructed a prospective cohort study to evaluate how these two factors influence the expression of COX-2 mRNA in gastric antral, corpus mucosa, and gastric ulcer. 15599211 2005
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 Biomarker disease BEFREE In the following article, the phenotypes of the two Ptgs (genes coding for COX-1 and COX-2) knockouts are summarized, and recent studies to investigate the effects of COX deficiency on cancer susceptibility, inflammatory response, gastric ulceration, and female reproductive processes are discussed. 10487525 1999
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 Biomarker disease BEFREE Artesunate markedly ameliorated aspirin induced gastric injury in rats by targeting oxidative stress and COX-2 dependent as well as COX-2 independent proinflammatory signaling pathways and could have a therapeutic potential in gastric ulcer disease. 29397336 2018
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 Biomarker disease BEFREE Most were reported to be free of adverse gastrointestinal effects, but it should be noted that in the healing process of gastric ulcers and in sodium-restricted states, adverse effects of selective COX-2 inhibitors could be expected. 11028754 2000
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 AlteredExpression disease BEFREE Both COX-1 and COX-2 are up-regulated in human gastric ulcers. 11136275 2001
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 Biomarker disease BEFREE In the following article, the phenotypes of the two Ptgs (genes coding for COX-1 and COX-2) knockouts are summarized, and recent studies to investigate the effects of COX deficiency on cancer susceptibility, inflammatory response, gastric ulceration, and female reproductive processes are discussed. 10487525 1999
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 Biomarker disease BEFREE Most were reported to be free of adverse gastrointestinal effects, but it should be noted that in the healing process of gastric ulcers and in sodium-restricted states, adverse effects of selective COX-2 inhibitors could be expected. 11028754 2000
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 Biomarker disease BEFREE Taken together, the activation of AMPK by rebamipide may be a molecular mechanism that contributes to induction of COX-2, probably resulting in protection against gastric ulcers. 28011266 2017
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.060 AlteredExpression disease BEFREE We constructed a prospective cohort study to evaluate how these two factors influence the expression of COX-2 mRNA in gastric antral, corpus mucosa, and gastric ulcer. 15599211 2005
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 Biomarker disease BEFREE Artesunate markedly ameliorated aspirin induced gastric injury in rats by targeting oxidative stress and COX-2 dependent as well as COX-2 independent proinflammatory signaling pathways and could have a therapeutic potential in gastric ulcer disease. 29397336 2018
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 Biomarker disease BEFREE Taken together, the activation of AMPK by rebamipide may be a molecular mechanism that contributes to induction of COX-2, probably resulting in protection against gastric ulcers. 28011266 2017
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.060 AlteredExpression disease BEFREE Both COX-1 and COX-2 are up-regulated in human gastric ulcers. 11136275 2001
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.050 AlteredExpression disease BEFREE In contrast, cells positive for IL-8 mRNA were observed in equal proportions and evenly in the epithelium and over the entire layer of the gastric mucosa regardless of the presence of gastric ulcer. 9773925 1998
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.050 GeneticVariation disease BEFREE Since allelic variation in cagA exists and distinct H. pylori subgenotypes may circulate in different regions, PCR using primers for a variable 3' region of the cagA gene according to a Japanese methodology and for a consensus cagA 3' region used in Western methods was used for cagA detection. cagA was present in 53 (71%) of 75 H. pylori-positive cases when analyzed by the consensus region method and was associated with duodenal ulcer disease (P = 0.02), but not with gastric ulcer (P = 0.26), when compared to patients with duodenitis or gastritis. 11158115 2001