Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8915
Gene Symbol: BCL10
BCL10
0.400 CausalMutation disease CGI
Entrez Id: 8915
Gene Symbol: BCL10
BCL10
0.400 Biomarker disease HPO
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.110 Biomarker disease BEFREE Genetic alterations of E-cadherin and beta-catenin in germinoma and teratoma: report of two central nervous system cases. 18158575 2007
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.110 AlteredExpression disease BEFREE The molecular studies have also enumerated several possible differentiation controls such as switching of KIT and mast cell growth factor gene expression in a lineage-associated manner, and loss of certain types of genes such as NME in teratomas that may act in a dominant negative fashion in differentiation. 9562446 1998
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.110 GeneticVariation disease CLINVAR
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.110 Biomarker disease HPO
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 Biomarker disease BEFREE These cells exhibited alkaline phosphatase activity and expressed pluripotency markers such as OCT4, SOX2, and NANOG, and also possessed differentiation abilities both in vitro and in vivo, proving by the formation of embryonic bodies and teratomas into three germ layers. 30701540 2019
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 AlteredExpression disease BEFREE OCT4 expression occurred in six of 10 cases and consistently in teratoma (four of four). 29106744 2018
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 AlteredExpression disease BEFREE MMR proteins were expressed in proliferating cells in the testes, while in malignant germ cells MMR protein expression was found to coincide with the expression of the pluripotency factor OCT4, with no or low expression in the more differentiated yolk sac tumours, choriocarcinomas and teratomas. 28536927 2017
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 Biomarker disease BEFREE Finally, by phylogenetic analysis of serial TGCTs that emerge with chemotherapy resistance, we show how TGCTs gain additional reciprocal loss of heterozygosity and that this is associated with loss of pluripotency markers (NANOG and POU5F1) in chemoresistant teratomas or transformed carcinomas. 27905446 2016
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease BEFREE More importantly, we demonstrate that miR-302 upregulation cannot lead OCT4 negative human adult mesenchymal stem cells (hMSCs) to acquire the teratoma formation in vivo. 26821070 2016
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 Biomarker disease BEFREE The generated iPS cells were evaluated for pluripotency by examining the expression of pluripotency markers (alkaline phosphatase, SSEA-4, TRA-1-60, and NANOG) and their ability to differentiate to three germ layers in vitro by forming embryoid bodies, and to form teratomas in vivo. 26975546 2016
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 PosttranslationalModification disease BEFREE EC differentiation to TE and YST entails reprogramming toward the somatic state, with loss of methyl-CpH but de novo methylation of pluripotency loci such as NANOG Extreme methyl-depletion among SE reflects the PGC methylation nadir. 27803193 2016
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease BEFREE Finally, by phylogenetic analysis of serial TGCTs that emerge with chemotherapy resistance, we show how TGCTs gain additional reciprocal loss of heterozygosity and that this is associated with loss of pluripotency markers (NANOG and POU5F1) in chemoresistant teratomas or transformed carcinomas. 27905446 2016
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 AlteredExpression disease BEFREE Clinically most informative immunohistochemical markers for GCT, except teratoma, are genes expressed in primordial germ cells/gonocytes and embryonic pluripotency-related factors, such as placental-like alkaline phosphatase (PLAP), OCT4 (POU5F1), NANOG, AP-2γ (TFAP2C) and LIN28, which are not expressed in normal adult germ cells. 26306513 2015
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease BEFREE In extensive experiments involving over 100 continuous passages, we observed that both enzymatic passaging and feeder-free culture were associated with genetic instability, higher rates of cell proliferation, and persistence of OCT4/POU5F1-positive cells in teratomas, with enzymatic passaging having the stronger effect. 25714340 2015
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 AlteredExpression disease BEFREE Clinically most informative immunohistochemical markers for GCT, except teratoma, are genes expressed in primordial germ cells/gonocytes and embryonic pluripotency-related factors, such as placental-like alkaline phosphatase (PLAP), OCT4 (POU5F1), NANOG, AP-2γ (TFAP2C) and LIN28, which are not expressed in normal adult germ cells. 26306513 2015
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease BEFREE Reprogrammed iPSCs were positive for oct3/4, nanog, and sox2, formed embryoid bodies in vitro, and induced teratomas in nonobese diabetic/severe combined immunodeficient mice. 24487392 2014
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 AlteredExpression disease BEFREE Supplementation with VPA for 5 days further upregulated OCT4, KLF4, and SOX2, and induced expression of NANOG, SSEA3, TRA-1-60, and TRA-1-81, with cells now able to form EBs and teratomas. 23050522 2013
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 GeneticVariation disease BEFREE By introducing a hyperactive variant of herpes simplex virus thymidine kinase gene into the 3'-untranslated region of the endogenous NANOG gene of hESCs through homologous recombination, we developed a safe and highly scalable approach to efficiently eliminate the teratoma risk associated with hESCs without apparent negative impact on their differentiated cell types. 22865887 2012
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 AlteredExpression disease BEFREE These cells also showed typical properties of ESCs (alkaline phosphatase (AP) positive, expressions of Oct4, Sox2, Nanog, and SSEA1, with the capacity to form teratomas and differentiate into various types of cells within three germ layers). 21308744 2011
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 Biomarker disease BEFREE By analyzing expression of pluripotency markers, methylation at the OCT4 and NANOG promoters and differentiation into teratomas, we determined that only one colony type represents true iPS cells, whereas the others represent reprogramming intermediates. 19826408 2009
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease LHGDN Immunohistochemical localization of nanog and Oct4 in stem cell compartments of human sacrococcygeal teratomas. 18439155 2008
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.100 Biomarker disease LHGDN Immunohistochemical localization of nanog and Oct4 in stem cell compartments of human sacrococcygeal teratomas. 18439155 2008
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.100 Biomarker disease BEFREE The abundance of factors associated with pluripotency (NANOG and OCT-3/4) and undifferentiated state (AP-2gamma) may explain the remarkable pluripotency of germ cell neoplasms, which are capable of differentiating to various somatic tissue components of teratomas. 16540528 2006