Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4477
Gene Symbol: MSMB
MSMB
0.010 Biomarker disease BEFREE The effect of biannual versus annual azithromycin distribution for trachoma control on serological response to merozoite surface protein 1 (MSP-1<sub>19</sub>), a surrogate for malaria incidence, was evaluated among children in Niger. 31796025 2019
Entrez Id: 84000
Gene Symbol: TMPRSS13
TMPRSS13
0.010 Biomarker disease BEFREE The effect of biannual versus annual azithromycin distribution for trachoma control on serological response to merozoite surface protein 1 (MSP-1<sub>19</sub>), a surrogate for malaria incidence, was evaluated among children in Niger. 31796025 2019
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.010 Biomarker disease BEFREE The effect of biannual versus annual azithromycin distribution for trachoma control on serological response to merozoite surface protein 1 (MSP-1<sub>19</sub>), a surrogate for malaria incidence, was evaluated among children in Niger. 31796025 2019
Entrez Id: 89782
Gene Symbol: LMLN
LMLN
0.010 Biomarker disease BEFREE The effect of biannual versus annual azithromycin distribution for trachoma control on serological response to merozoite surface protein 1 (MSP-1<sub>19</sub>), a surrogate for malaria incidence, was evaluated among children in Niger. 31796025 2019
Entrez Id: 1731
Gene Symbol: SEPTIN1
SEPTIN1
0.010 Biomarker disease BEFREE Of those enrolled, 25 717 (98·2%) received the trachoma regimen and 25 819 (98·6%) received the first dose of the scabies regimen between Sept 1, and Oct 2, 2015. 30223985 2018
Entrez Id: 406947
Gene Symbol: MIR155
MIR155
0.010 Biomarker disease BEFREE We investigated whether the single or combined expression of miR-147b, miR-1285, miR-155 and miR-184 was able to identify individuals with increased risk of incident or progressive scarring trachoma. 28175294 2017
Entrez Id: 100126311
Gene Symbol: MIR147B
MIR147B
0.010 AlteredExpression disease BEFREE We investigated whether the single or combined expression of miR-147b, miR-1285, miR-155 and miR-184 was able to identify individuals with increased risk of incident or progressive scarring trachoma. 28175294 2017
Entrez Id: 406960
Gene Symbol: MIR184
MIR184
0.010 Biomarker disease BEFREE We investigated whether the single or combined expression of miR-147b, miR-1285, miR-155 and miR-184 was able to identify individuals with increased risk of incident or progressive scarring trachoma. 28175294 2017
Entrez Id: 3822
Gene Symbol: KLRC2
KLRC2
0.010 Biomarker disease BEFREE We found no evidence for an association between the numbers of KLRC2 gene copies and the clinical manifestations of trachoma (follicular trachoma or conjunctival scarring). 27312142 2016
Entrez Id: 3804
Gene Symbol: KIR2DL3
KIR2DL3
0.010 Biomarker disease BEFREE Conjunctival scarring in trachoma is associated with the HLA-C ligand of KIR and is exacerbated by heterozygosity at KIR2DL2/KIR2DL3. 24651768 2014
Entrez Id: 3803
Gene Symbol: KIR2DL2
KIR2DL2
0.010 GeneticVariation disease BEFREE Conjunctival scarring in trachoma is associated with the HLA-C ligand of KIR and is exacerbated by heterozygosity at KIR2DL2/KIR2DL3. 24651768 2014
Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
0.010 Biomarker disease BEFREE Conjunctival scarring in trachoma is associated with the HLA-C ligand of KIR and is exacerbated by heterozygosity at KIR2DL2/KIR2DL3. 24651768 2014
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.010 Biomarker disease BEFREE These data are consistent with a role for IL-17A in orchestrating the proinflammatory response in trachoma. 21911461 2011
Entrez Id: 283297
Gene Symbol: OR10A4
OR10A4
0.010 GeneticVariation disease BEFREE The objective was to investigate whether haptoglobin (Hp) haplotypes constructed from the functional polymorphism (Hp1/Hp2) plus the functional promoter SNPs -61A-C (rs5471) and -101C-G (rs5470), or sickle cell trait (HbAS, rs334) were associated with risk of active trachoma when stratified by age and sex, in rural Gambian children. 20552021 2010
Entrez Id: 3240
Gene Symbol: HP
HP
0.010 GeneticVariation disease BEFREE These data indicate that genetic variation in Hp may affect susceptibility to active trachoma differentially by sex in The Gambia. 20552021 2010
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 Biomarker disease BEFREE The data suggest that HLA-DRB*11 may offer protection from trichiasis in trachoma hyperendemic villages. 18824733 2009
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 GeneticVariation disease BEFREE The IL8-251 rare allele (IL8-251 TT) was associated with protection from scarring trachoma (OR = 0.29 p = 0.027). 20015396 2009
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.010 Biomarker disease BEFREE Human leukocyte antigen (HLA)-B, DRB1, and DQB1 allotypes associated with disease and protection of trachoma endemic villagers. 18824733 2009
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.010 Biomarker disease BEFREE In addition, HLA-B*14 was significantly associated with inflammatory trachoma + follicular trachoma (OR, 3.76; 95% CI, 1.70-8.33; P=0.04). 18824733 2009
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.010 Biomarker disease BEFREE In support of these findings, anti-inflammatory cytokine IL-1 receptor antagonist (IL-1Ra) was negatively associated with chronic scarring trachoma (r = -0.249, P = 0.001). 18628987 2008
Entrez Id: 3598
Gene Symbol: IL13RA2
IL13RA2
0.010 Biomarker disease BEFREE Additional cytokines (Th1, IL-12p40 [r = -0.212, P<0.01], and Th2, IL-4 and IL-13 [r = -0.165 and -0.189, respectively, P<0.05 for both]) were negatively associated with chronic scarring trachoma, suggesting a protective role. 18628987 2008
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 Biomarker disease BEFREE Chemokine protein levels for CCL11 (Eotaxin), CXCL8 (IL-8), CXCL9 (MIG), and CCL2 (MCP-1) were elevated in chronic scarring trachoma compared with age and sex matched controls (P<0.05, for all). 18628987 2008
Entrez Id: 3587
Gene Symbol: IL10RA
IL10RA
0.010 AlteredExpression disease BEFREE Conversely, a pathogenic role for the Th3/Tr1 cytokine IL-10 (r = 0.180, P<0.05) was evident with increased levels for all trachoma grades. 18628987 2008
Entrez Id: 10148
Gene Symbol: EBI3
EBI3
0.010 Biomarker disease BEFREE Our quantitative detection of previously uncharacterized and partially characterized cytokines, a soluble cytokine receptor, and chemokines for each trachoma grade and associations with C. trachomatis infections provide, to date, the most comprehensive immunologic evaluation of trachoma. 18628987 2008
Entrez Id: 3600
Gene Symbol: IL15
IL15
0.010 Biomarker disease BEFREE New risk factors for chronic scarring trachoma included IL-6 and IL-15 (r = 0.259 and 0.292, respectively, P<0.005 for both) with increased levels for concurrent C. trachomatis infections (r = 0.206, P<0.05, and r = 0.304, P<0.005, respectively). 18628987 2008