Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 GeneticVariation disease BEFREE The IL8-251 rare allele (IL8-251 TT) was associated with protection from scarring trachoma (OR = 0.29 p = 0.027). 20015396 2009
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.010 Biomarker disease BEFREE Human leukocyte antigen (HLA)-B, DRB1, and DQB1 allotypes associated with disease and protection of trachoma endemic villagers. 18824733 2009
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.010 Biomarker disease BEFREE In addition, HLA-B*14 was significantly associated with inflammatory trachoma + follicular trachoma (OR, 3.76; 95% CI, 1.70-8.33; P=0.04). 18824733 2009
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.010 Biomarker disease BEFREE In support of these findings, anti-inflammatory cytokine IL-1 receptor antagonist (IL-1Ra) was negatively associated with chronic scarring trachoma (r = -0.249, P = 0.001). 18628987 2008
Entrez Id: 3598
Gene Symbol: IL13RA2
IL13RA2
0.010 Biomarker disease BEFREE Additional cytokines (Th1, IL-12p40 [r = -0.212, P<0.01], and Th2, IL-4 and IL-13 [r = -0.165 and -0.189, respectively, P<0.05 for both]) were negatively associated with chronic scarring trachoma, suggesting a protective role. 18628987 2008
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 Biomarker disease BEFREE Chemokine protein levels for CCL11 (Eotaxin), CXCL8 (IL-8), CXCL9 (MIG), and CCL2 (MCP-1) were elevated in chronic scarring trachoma compared with age and sex matched controls (P<0.05, for all). 18628987 2008
Entrez Id: 3587
Gene Symbol: IL10RA
IL10RA
0.010 AlteredExpression disease BEFREE Conversely, a pathogenic role for the Th3/Tr1 cytokine IL-10 (r = 0.180, P<0.05) was evident with increased levels for all trachoma grades. 18628987 2008
Entrez Id: 10148
Gene Symbol: EBI3
EBI3
0.010 Biomarker disease BEFREE Our quantitative detection of previously uncharacterized and partially characterized cytokines, a soluble cytokine receptor, and chemokines for each trachoma grade and associations with C. trachomatis infections provide, to date, the most comprehensive immunologic evaluation of trachoma. 18628987 2008
Entrez Id: 3600
Gene Symbol: IL15
IL15
0.010 Biomarker disease BEFREE New risk factors for chronic scarring trachoma included IL-6 and IL-15 (r = 0.259 and 0.292, respectively, P<0.005 for both) with increased levels for concurrent C. trachomatis infections (r = 0.206, P<0.05, and r = 0.304, P<0.005, respectively). 18628987 2008
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.010 Biomarker disease BEFREE Additional cytokines (Th1, IL-12p40 [r = -0.212, P<0.01], and Th2, IL-4 and IL-13 [r = -0.165 and -0.189, respectively, P<0.05 for both]) were negatively associated with chronic scarring trachoma, suggesting a protective role. 18628987 2008
Entrez Id: 3597
Gene Symbol: IL13RA1
IL13RA1
0.010 Biomarker disease BEFREE Additional cytokines (Th1, IL-12p40 [r = -0.212, P<0.01], and Th2, IL-4 and IL-13 [r = -0.165 and -0.189, respectively, P<0.05 for both]) were negatively associated with chronic scarring trachoma, suggesting a protective role. 18628987 2008
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.010 Biomarker disease BEFREE In support of these findings, anti-inflammatory cytokine IL-1 receptor antagonist (IL-1Ra) was negatively associated with chronic scarring trachoma (r = -0.249, P = 0.001). 18628987 2008
Entrez Id: 8809
Gene Symbol: IL18R1
IL18R1
0.010 Biomarker disease BEFREE Our quantitative detection of previously uncharacterized and partially characterized cytokines, a soluble cytokine receptor, and chemokines for each trachoma grade and associations with C. trachomatis infections provide, to date, the most comprehensive immunologic evaluation of trachoma. 18628987 2008
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 GeneticVariation disease BEFREE New risk factors for chronic scarring trachoma included IL-6 and IL-15 (r = 0.259 and 0.292, respectively, P<0.005 for both) with increased levels for concurrent C. trachomatis infections (r = 0.206, P<0.05, and r = 0.304, P<0.005, respectively). 18628987 2008
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.010 Biomarker disease BEFREE This work supports the hypothesis that MMP-9 has a role in the pathogenesis of blinding trachoma. 16643654 2006
Entrez Id: 50943
Gene Symbol: FOXP3
FOXP3
0.010 AlteredExpression disease LHGDN Conjunctival FOXP3 expression in trachoma: do regulatory T cells have a role in human ocular Chlamydia trachomatis infection? 16881731 2006
Entrez Id: 10894
Gene Symbol: LYVE1
LYVE1
0.010 GeneticVariation disease BEFREE To test this hypothesis, the genome of an oculotropic trachoma isolate (A/HAR-13) was sequenced and compared to the genome of a genitotropic (D/UW-3) isolate. 16177312 2005
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.010 Biomarker disease BEFREE Fifty Omanis with blinding trachoma were serologically typed for HLA A, B, C, DR, and DQ antigens and DNA typed for class II DR beta and DQ beta alleles and compared with a population of 100 healthy controls. 9274403 1997
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.010 Biomarker disease BEFREE An 820 bp AccI-PstI fragment of the 60 kDa cysteine rich outer membrane protein (CrP) gene from C. trachomatis serovar L1 was used as a probe to locate the 60 kDa CrP gene of a recent serovar B trachoma isolate (Jali 20/OT). 2612891 1989